bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0469_orf2
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI1115c 192 4e-48
> 5833.PFI1115c
Length=343
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 133/183 (72%), Gaps = 6/183 (3%)
Query 3 EEEFDEDANKGKKETNSESTDAKQSQNEETTEKSKEAVVIAWARKMLSLWEDELKHRSED 62
E+E ++ ++K K + NS + +++ NE+ + KE ++ W ++ + W +E+++ +
Sbjct 155 EDEIEKGSDK-KDKNNSNVSISEKENNEKGKKIDKEKIIHEWIKRTMKEWNEEIENIVDS 213
Query 63 EKATAEGRQQTALHRQTKKDLKPLFKKLKQRDLEADILEKLFSIVQLCDERRYRDAHGAF 122
+K + A + QT KDLKPL KKLKQ+ LE+DIL+K+++IV C E+ ++ AH A+
Sbjct 214 KKKIKQ-----ATYLQTHKDLKPLEKKLKQKTLESDILDKIYNIVSCCQEKNFKAAHDAY 268
Query 123 MLLAIGNAAWPMGVTMVGIHERAGRSKLNTSQVAHILNDETTRKYIQMFKRLMSFAQRKF 182
MLLAIGNAAWPMGVTMVGIHERAGRSK+ S+VAHILNDETTRKYIQM KRL+SF QRK+
Sbjct 269 MLLAIGNAAWPMGVTMVGIHERAGRSKIYASEVAHILNDETTRKYIQMIKRLLSFCQRKY 328
Query 183 PAN 185
N
Sbjct 329 CTN 331
Lambda K H
0.313 0.126 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40134932565
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40