bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0451_orf1 Length=231 Score E Sequences producing significant alignments: (Bits) Value 33169.AGOS_AFR092W 60.5 4e-08 > 33169.AGOS_AFR092W Length=1423 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 6/106 (5%) Query 1 SYGVDIWAVGTIFFELLTGERLFECLNMNEASRQIPAFKEKDVT--DRLPFLRQDAMSFL 58 S VDIW++G + E+ G+R + L + A QI K D LP + QD +FL Sbjct 1307 SAKVDIWSLGCVVLEMFAGKRPWSNLEVVAAMFQIGKSKSAPPIPEDTLPHISQDGRAFL 1366 Query 59 LKCLTKDPQKRPTAFQLLTTPFLFPLHIYQIRRRVETTDIYNAYMQ 104 C DP++RPTA LL+ PF + R TD+YN Q Sbjct 1367 DDCFMIDPEERPTADTLLSHPFCQVPKEFNFR----DTDLYNFIKQ 1408 Lambda K H 0.320 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 65005431479 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40