bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0444_orf1 Length=279 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0250 92.4 1e-17 > 5833.PF14_0250 Length=1320 Score = 92.4 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 21/290 (7%) Query 1 WLFRLEREPEWVKWEIDENNNDYVDRIWAVRGTAFPKMWLLNTMWETTGDLELSPSGEVK 60 + L+R + D+ N V++I +GT+ P +WL N ++E T LS + Sbjct 1001 FFMSLKRSKNFPISNYDKKNYHIVEQIITFQGTSSPSIWLTNLIYELTPYPFLSKG---R 1057 Query 61 LHSGFLFAFESIFKDML----KDDLQEVARKAEATRKRQ-VVLFTGHSLGGAVAQIAAWY 115 LH G+LF FE K L K L E+ K++ T + ++FTGHS G A+AQI+++Y Sbjct 1058 LHKGYLFMFEQTVKPYLDGLKKVLLNELKNKSKYTSETPYAIIFTGHSFGAALAQISSFY 1117 Query 116 YANQTRSLLDAGLLQIRCVTFGAPAWGNEAAYKEFTSTGVLVHDIATSMDPVTTLNGEPA 175 ++ + L + L++ +TFG P + + Y++F ++GV++++I + DPV + P Sbjct 1118 FS-KIMDLKNRTNLKLYSITFGLPTYQDSTFYEDFRNSGVIINNININHDPVRVIMAVPG 1176 Query 176 LGHGLQWRKPFHYRIMLDDLERVVVASTNPREPNFFGRLWTRTD-LHAGNFLKRTFGALA 234 + + + R ++ + E V +F ++ + + N + A Sbjct 1177 INDFVNHDEE---RKLMINFE---VEQLKKLNYDFGKSVFNAVEFFNVKNHQRSMLYVFA 1230 Query 235 SMSHVDSVF-----LNPVLTHFLSYTAVLTIMADLVPEADFGSALAAPLL 279 +VF L+ + TH+ Y LT+++ V EAD+G+ P Sbjct 1231 KYIFNKNVFLELGELHILQTHYYFYYVFLTLLSGWVNEADWGTYFMVPFF 1280 Lambda K H 0.322 0.136 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 92191809285 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40