bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0444_orf1
Length=279
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0250 92.4 1e-17
> 5833.PF14_0250
Length=1320
Score = 92.4 bits (228), Expect = 1e-17, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 21/290 (7%)
Query 1 WLFRLEREPEWVKWEIDENNNDYVDRIWAVRGTAFPKMWLLNTMWETTGDLELSPSGEVK 60
+ L+R + D+ N V++I +GT+ P +WL N ++E T LS +
Sbjct 1001 FFMSLKRSKNFPISNYDKKNYHIVEQIITFQGTSSPSIWLTNLIYELTPYPFLSKG---R 1057
Query 61 LHSGFLFAFESIFKDML----KDDLQEVARKAEATRKRQ-VVLFTGHSLGGAVAQIAAWY 115
LH G+LF FE K L K L E+ K++ T + ++FTGHS G A+AQI+++Y
Sbjct 1058 LHKGYLFMFEQTVKPYLDGLKKVLLNELKNKSKYTSETPYAIIFTGHSFGAALAQISSFY 1117
Query 116 YANQTRSLLDAGLLQIRCVTFGAPAWGNEAAYKEFTSTGVLVHDIATSMDPVTTLNGEPA 175
++ + L + L++ +TFG P + + Y++F ++GV++++I + DPV + P
Sbjct 1118 FS-KIMDLKNRTNLKLYSITFGLPTYQDSTFYEDFRNSGVIINNININHDPVRVIMAVPG 1176
Query 176 LGHGLQWRKPFHYRIMLDDLERVVVASTNPREPNFFGRLWTRTD-LHAGNFLKRTFGALA 234
+ + + R ++ + E V +F ++ + + N + A
Sbjct 1177 INDFVNHDEE---RKLMINFE---VEQLKKLNYDFGKSVFNAVEFFNVKNHQRSMLYVFA 1230
Query 235 SMSHVDSVF-----LNPVLTHFLSYTAVLTIMADLVPEADFGSALAAPLL 279
+VF L+ + TH+ Y LT+++ V EAD+G+ P
Sbjct 1231 KYIFNKNVFLELGELHILQTHYYFYYVFLTLLSGWVNEADWGTYFMVPFF 1280
Lambda K H
0.322 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 92191809285
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40