bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0391_orf1 Length=199 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0610c 85.9 6e-16 > 5833.PFE0610c Length=260 Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 8/139 (5%) Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89 M++Y+C C + +KKL+ D+C H++C CL+ K CP+C+ Sbjct 1 MDEYKCISCFEDIYVNNEKKLYFFDICKHKICGECLENHLNKLN--------KQYCPLCK 52 Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149 S+T+ N L + + +++ +K +R ++ N R NFENTP YN+YLE+ E+ IY L Sbjct 53 VSVTKKNVSLFDIEERIYANQKNVRSKLTEIFNKRRHNFENTPLYNNYLEKVEDMIYVLT 112 Query 150 YGTDEQLKRRLENRLRELE 168 DE+ ++ +E +++ E Sbjct 113 NECDEKKRKIIEAYIKKYE 131 Lambda K H 0.322 0.135 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 47162034073 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40