bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0374_orf1 Length=263 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0352 404 1e-111 > 5833.PF14_0352 Length=847 Score = 404 bits (1039), Expect = 1e-111, Method: Compositional matrix adjust. Identities = 180/248 (72%), Positives = 211/248 (85%), Gaps = 0/248 (0%) Query 16 LVHADVYAFVVKYKDEINKALVYDRDFDYDYFAFKTLERSYLLRAGGVIVERPQHTLMRV 75 L+ +VY F++ +KD +NK + Y RDF+YDYF FKTLERSYLLR I+ERPQH LMRV Sbjct 154 LISKEVYDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRV 213 Query 76 ACGIHCGDLQKTLETYELMSCKFFIHATPTLFNAGTPRPQMSSCFLLTMKEDSIDGIFST 135 + GIH D+ K LETY LMS K+F HATPTLFN+GTPRPQMSSCFLL+MK DSI+GIF T Sbjct 214 SIGIHIDDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFET 273 Query 136 LRQCALISKTAGGLGLSVTDIRATGSYIRGTNGYSNGLIPMLRVFNDASRYVDQGGGKRK 195 L+QCALISKTAGG+G++V DIR SYIRGTNG SNGL+PMLRVFND +RYVDQGGGKRK Sbjct 274 LKQCALISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRK 333 Query 196 GSLAVYVEPWHADIFEFLEIRKNHGKEKMRARDLFPALWVPDLFMQRVYENGSWTLMCPC 255 GS AVY+EPWH+DIFEFL++RKNHGKE++RARDLF A+WVPDLFM+RV EN +WTLMCP Sbjct 334 GSFAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPN 393 Query 256 ECPGLTSC 263 ECPGL+ Sbjct 394 ECPGLSET 401 Lambda K H 0.326 0.141 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 82550835765 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40