bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0374_orf1
Length=263
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0352 404 1e-111
> 5833.PF14_0352
Length=847
Score = 404 bits (1039), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 180/248 (72%), Positives = 211/248 (85%), Gaps = 0/248 (0%)
Query 16 LVHADVYAFVVKYKDEINKALVYDRDFDYDYFAFKTLERSYLLRAGGVIVERPQHTLMRV 75
L+ +VY F++ +KD +NK + Y RDF+YDYF FKTLERSYLLR I+ERPQH LMRV
Sbjct 154 LISKEVYDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRV 213
Query 76 ACGIHCGDLQKTLETYELMSCKFFIHATPTLFNAGTPRPQMSSCFLLTMKEDSIDGIFST 135
+ GIH D+ K LETY LMS K+F HATPTLFN+GTPRPQMSSCFLL+MK DSI+GIF T
Sbjct 214 SIGIHIDDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFET 273
Query 136 LRQCALISKTAGGLGLSVTDIRATGSYIRGTNGYSNGLIPMLRVFNDASRYVDQGGGKRK 195
L+QCALISKTAGG+G++V DIR SYIRGTNG SNGL+PMLRVFND +RYVDQGGGKRK
Sbjct 274 LKQCALISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRK 333
Query 196 GSLAVYVEPWHADIFEFLEIRKNHGKEKMRARDLFPALWVPDLFMQRVYENGSWTLMCPC 255
GS AVY+EPWH+DIFEFL++RKNHGKE++RARDLF A+WVPDLFM+RV EN +WTLMCP
Sbjct 334 GSFAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPN 393
Query 256 ECPGLTSC 263
ECPGL+
Sbjct 394 ECPGLSET 401
Lambda K H
0.326 0.141 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 82550835765
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40