bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0368_orf1 Length=359 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0310 141 4e-32 > 5833.PF11_0310 Length=609 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/351 (28%), Positives = 153/351 (43%), Gaps = 31/351 (8%) Query 1 QRKPCGVGRYFVLVTYVIYAFLTARVYFAWPNLSNLLFRANAYSWLCDQYLAEGKPDMRE 60 Q+ P + R +L Y + LT R++F WPNLSNLLFR + Y W C Q G+ D + Sbjct 78 QKTPFNINRSVLLFVYFMLIVLTNRLFFGWPNLSNLLFREDTYIWKC-QKNEHGEYDRFD 136 Query 61 PVHGGKRYICEDQNSAVGNIFVTCLAFAFSFSLAAGLLLDYLGPRITAAIGQLMNALAWV 120 KRY C++Q+ AV IF+ + F+FS GL++DYLG R + +G ++N + WV Sbjct 137 D----KRYSCDEQDKAVQTIFIFGSSAYFAFSFFNGLIVDYLGSRFSMLLGHILNLIGWV 192 Query 121 LLAFGSESVQTYIAAFIFMGIGSDIGYLPLLSSANLFPGHEGLIVAILGASKSASFAVPT 180 L+ +E Y+ IFM D+ L+++ LFPG+E LIV I+ + S S T Sbjct 193 LMLMSNEHFDAYVIGGIFMSASIDLASFSTLNASGLFPGNENLIVNIISGAGSLSTGTMT 252 Query 181 ILDKIEVANPGIGLKEVCLGYALVGPGLCFVVSLFLIPYKHFKPWNEFTEIEKGGDYHHP 240 ILD I + + K L Y +C VS F + P N + + +Y++ Sbjct 253 ILDLI-ITRYNLPFKTFMLWY------MCISVSFFFLLTIFLFPKNRYYRQYEFDNYYNN 305 Query 241 IQRVNDSFASIEAHAWRDSFSSFHEGQWPLYAH----DGHSGATASEPGRRSKNFLDVPR 296 + I+ + D F +Y H DGH N L V + Sbjct 306 KE--------IDLKDYED----FDNSTKKIYDHDKKKDGHQYNNNVHSTVGVNNSLVVKK 353 Query 297 QGAGKGQGKKTRSECGGADEERKTQDDKQNKGGVSPPIADQTEEVPAIYQA 347 G + E + + +D +N A T + ++ Sbjct 354 HEGGIN---RRELELKNVNSSKHVFNDLENNDSKKDEYAASTNNSSNLVKS 401 Lambda K H 0.321 0.138 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 136875533910 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40