bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0354_orf2 Length=302 Score E Sequences producing significant alignments: (Bits) Value 5833.PFB0210c 237 3e-61 > 5833.PFB0210c Length=504 Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 178/291 (61%), Gaps = 3/291 (1%) Query 11 IIVDFDWCKKDPNHMVDCSDGVLYGSLITTAVFIGLTFGCLLAGPVTNFGRRVSLLLTNL 70 I+V+F+WCK + + + +CS+ + S + +VFIG GC +G + FGRR+SLL+ Sbjct 54 IVVEFEWCKGEKDRL-NCSNNTIQSSFLLASVFIGAVLGCGFSGYLVQFGRRLSLLIIYN 112 Query 71 LFLVSSALAAAADGVASLFLARLYQGMAVGLATVCVPMYISEFSPDTSRGFYGTLHQLLI 130 F + S L + ++ ARL G +GL TV VPMYISE + +G YG +HQL I Sbjct 113 FFFLVSILTSITHHFHTILFARLLSGFGIGLVTVSVPMYISEMTHKDKKGAYGVMHQLFI 172 Query 131 TIGILVATLLGLAFGSPPTDTDFSYEVTTFQQCWWRFMLAFPAGVSIIAILLLWLVYPTE 190 T GI VA +LGLA G P D + +T+F + WWR M FP+ +S+I IL L + + E Sbjct 173 TFGIFVAVMLGLAMGEGP-KADSTEPLTSFAKLWWRLMFLFPSVISLIGILALVVFFKEE 231 Query 191 SPHFLMHQGRKNTATALLKELLGKEDVSSEVQTIEVAICQQKVLEAESLSLRKAMTYPAY 250 +P+FL +GR + +LK++ ++V + I+ A+ Q + + SLSL A+ P+Y Sbjct 232 TPYFLFEKGRIEESKNILKKIYETDNVDEPLNAIKEAVEQNESAKKNSLSLLSALKIPSY 291 Query 251 RHVLLLAFFLSAFQQFTGINILVANSNKLYTSLNIDASLVTALTVVTGLVN 301 R+V++L LS QQFTGIN+LV+NSN+LY +D+ L+T L+VV VN Sbjct 292 RYVIILGCLLSGLQQFTGINVLVSNSNELYKEF-LDSHLITILSVVMTAVN 341 Lambda K H 0.326 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 105013574575 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40