bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0352_orf1 Length=380 Score E Sequences producing significant alignments: (Bits) Value 5833.PFF1415c 305 2e-81 > 5833.PFF1415c Length=380 Score = 305 bits (780), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 145/364 (39%), Positives = 226/364 (62%), Gaps = 10/364 (2%) Query 9 FEFNLLPLFTNFVNADPSQPGNLYATLGLKRNATTTEIKKAYRKLSMKFHPDKNKSPDAE 68 +E + +T D LY LG+ +NA++ +IKK+YRKLS K+HPDK K ++ Sbjct 26 WEIFIEAWYTQEETDDDYDRMKLYDVLGVDKNASSDDIKKSYRKLSKKYHPDKAKDKNSN 85 Query 69 AKFREISYAYEVLSNAEQRKVYDAQGHAGLERLKQGA-GQDSGHPFDVFSEFFGGFGGFG 127 KF EI+ AYE+L + E+RK+YD G + ++ +D F+++ FFG Sbjct 86 NKFSEIAEAYEILGDEEKRKIYDRYGLEAAKNMESNKMDEDPSDHFNIYERFFGA----- 140 Query 128 GFGGRGGAREIPQAPSTVLKLPVTLEQIYDGVSLDFSFSRPVLCINADECMMKKKECKGP 187 G EI +A S +L + + LEQ+Y+G ++R V C+ +D+C+ +KKEC G Sbjct 141 ---GFKREEEIKKADSLILNIEINLEQLYNGEFFSVMYTRDVKCLRSDDCIERKKECSGK 197 Query 188 GIRIITQQMGPGFIVQNQIQDDSCVDQGRAWIQGCKECPSGITELESIELSATVERGMQT 247 G + ITQQ+ PGFI+QN+I+DD C+D+G+AW + C CP+G+ E ++IEL+ +E+GM+ Sbjct 198 GYKTITQQVAPGFIMQNKIKDDECIDRGKAWNKKCTYCPNGMKEEKTIELTLEIEKGMKN 257 Query 248 GEKIMFEGMGENRIGHEPGDLILIVEELPHSRYTRRGNDLHMTLRIDLMQALVGFELKFD 307 +KI+FE G+ IG+E GD+I IV+ H Y R NDLH I L AL+GF + Sbjct 258 NDKIVFEKKGKQEIGYENGDIIFIVQTKKHKIYERVNNDLHQIYEISLKDALIGFSKNLE 317 Query 308 HLDKKEVQIQKSSVTYDGEVIKVKGKGMPKRGNTAAYGDLHVTCKIKYPKQLNDKQKRLI 367 H+ K + I K +VT+ EV++V+ KGMP + N+ +GDL++ I++PKQL D+QK+++ Sbjct 318 HISGKPININKQNVTFHNEVLRVQNKGMPIK-NSNKFGDLYIKFLIQFPKQLTDEQKKVL 376 Query 368 KEAL 371 + L Sbjct 377 ADLL 380 Lambda K H 0.318 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 148156935250 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40