bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0346_orf2 Length=253 Score E Sequences producing significant alignments: (Bits) Value 7165.AGAP005006-PA 88.2 2e-16 > 7165.AGAP005006-PA Length=1102 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 12/149 (8%) Query 1 LLRNITRDRASICAAMSFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARMYLLSDLLAN 60 L+R++T +R I AM FC+ H ++ E+C C+TESL+ +T + ++AR+YL+SD+L N Sbjct 442 LIRHLTPERQKIGDAMIFCIEHADAAEEICECITESLSSNETVVKKKVARIYLISDILHN 501 Query 61 SSAQTAHAWTYRHHLEKHLPFIADRWSKVLEDLRLGVGVGGASPRTQQEQWQGVERALYK 120 S+ + +A +R +EK+L I + L + G R GV RA Sbjct 502 SAVKVQNASFFRKAMEKNLLDIFRNLNAYYMQLDSRLKAEGFKSRV-----MGVFRA--- 553 Query 121 MTKLWEAWGVYPPAFLRGIEATLCGRDIT 149 WE W +YP FL ++ T G +T Sbjct 554 ----WEEWAIYPRDFLVKLQHTFLGIQMT 578 Lambda K H 0.321 0.132 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 77445647488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40