bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0332_orf1 Length=315 Score E Sequences producing significant alignments: (Bits) Value 243233.MCA0774 177 4e-43 > 243233.MCA0774 Length=883 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 117/322 (36%), Positives = 164/322 (50%), Gaps = 15/322 (4%) Query 1 TPRLEVLRSEYKEDAHTFEISFRQHTPPTPGQETKLPQVIPIKIGLIGKDSHRDLLQ--- 57 TP L L Y T +S RQ PPTPGQ K P IP+ +GL+ +D L+ Sbjct 452 TPELR-LDPVYDAGTRTLRLSVRQSCPPTPGQPVKQPLHIPLALGLLARDGRELPLRLAG 510 Query 58 ------PSMVLEMTEEEQTFRVRGVDEDCVPSILRGFSAPVRLINRRTAEENAFLLAYDT 111 + VL + EQ F V E V S LRGFSAPV L R+AEE AFL +DT Sbjct 511 EAEAGPTTRVLHVRAAEQVFEFLDVPERPVVSALRGFSAPVGLKMERSAEELAFLFIHDT 570 Query 112 DPVTKWFSSRALAAPIVISRCEKIAADKNVQHFAGLPDEYVEALRTALTDQATDSALKAL 171 D +W + ++L +++ E+I A +N Q L + RT L A D + +AL Sbjct 571 DAFNRWDAGQSLMVQVMLGLIERIRAGENPQ---SLDPNLIGTFRTLLAQPAADLSYQAL 627 Query 172 ILQLPDWNVLAAEMRPIDPEALHKAIRTVKADLATALKSEMLELYRQLTLPAGQEEKVTE 231 +L LP + +A+ M DP+A+H+A +TV+ LATAL + L LYR+ A + + Sbjct 628 LLGLPSEDYVASLMSVADPDAIHRARQTVRKTLATALAEDFLRLYREHH--AAETGGLEP 685 Query 232 GEAGRRKLRNALLHFLSAARDEEAVERAFMHFTEAKCMTDKYAGLIALSNMPTEQREHAF 291 E RR+L+NA L F++ E+ + F EA+ MTD+ A L A+ N + Sbjct 686 AERNRRRLKNACLGFIAELETPESYDLCVRQFREARTMTDQIAALGAIVNSAHPDKADCL 745 Query 292 SHFYDDAAGDPLVVDKWFKAQA 313 FY + LV+DKWF QA Sbjct 746 ESFYARWREEALVIDKWFGLQA 767 Lambda K H 0.318 0.133 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 111750132791 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40