bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0319_orf1 Length=282 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_2730 215 1e-54 > 5807.cgd1_2730 Length=693 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 116/240 (48%), Positives = 151/240 (62%), Gaps = 24/240 (10%) Query 1 MCRIYVGSLDYYLTELEIKSVFQAFGTVTSVDMPKEGDRSKGFCFVEYASPEAAQMALST 60 + RIYVGSLDY L E ++K VF +FG + ++DMP+EG+RSKGFCF+EY S E+A+MAL+T Sbjct 289 ISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGNRSKGFCFIEYTSQESAEMALAT 348 Query 61 MHNFVLKGRTIKVGRPT-AVGAGQPQQLLARPLGGYDMNVGAAATPGMSLVSSAQAGAAV 119 M+ FVLKGR I+VGRPT A + Q GG NV P +++ ++ Sbjct 349 MNRFVLKGRPIRVGRPTNAASSNGNQSGSGGIGGGGSGNV---INPNIAVFNNNHI---- 401 Query 120 ATAILAGRAGQTPQGDMASLVSMGQVTPEKQQDSAPGSNRIYVGNVPFGFSSEDLKKIFV 179 Q Q + G T + NRIY+G+VP+ F+++DL+ IF Sbjct 402 --------THQNHQIQSETTHGTGIATHSQ--------NRIYIGSVPYSFTTDDLRHIFK 445 Query 180 CFGSILTCQLLPSQENPQQHRGYGFIEFASPAAAKLAIDTMNGFEVVGKQLKVNYATALR 239 FG IL+CQL+PS E P HRGYGFIEF + AKLAI+TMNGFEV GKQLKVN ATAL+ Sbjct 446 TFGVILSCQLIPSIEKPGTHRGYGFIEFGTADQAKLAIETMNGFEVGGKQLKVNVATALK 505 Lambda K H 0.317 0.130 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 93999491820 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40