bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0317_orf2 Length=223 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1855w 221 1e-56 > 5833.PFL1855w Length=967 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 110/199 (55%), Positives = 150/199 (75%), Gaps = 1/199 (0%) Query 3 LLSIVNSKLPDIGELVIKRLILQFRRAYRRDDKVVCLGCVEFFAHLVNQRIAHELLALQL 62 LL IVNSK P+IG L I+R+IL FRRAY+R+DK++C V+F AH++NQRI HE++ LQL Sbjct 492 LLCIVNSKFPNIGLLTIQRIILHFRRAYKRNDKILCFNTVKFIAHMINQRIVHEIVGLQL 551 Query 63 CELLLQQPTNDSVEVCIGFLKAVGQVLEDVCRGGFDAAFERLRAILQEGETDKKTQYSIE 122 C LLLQ TNDSV+VC FL VG++ ++CR G D F+RL+ I+QEG+ + KTQY IE Sbjct 552 CSLLLQNITNDSVQVCTYFLAEVGELYTNICRKGLDIIFDRLKDIIQEGQINIKTQYDIE 611 Query 123 ALWDIRRNGFKDFPGVIEDLDLVEVEDKITHEVDIMDPSIKGEEMLNIFKPQDPDEYEED 182 LW+ R+N FKDFP V +DL+L++ EDKI HE+DI+D S +E LNIF+ ++YEE+ Sbjct 612 KLWNYRKNNFKDFPSVHDDLNLIDEEDKIVHEIDILDESFNSQEELNIFREVPYEQYEEE 671 Query 183 EKKWSALSKEIL-GEDSTD 200 E +W +S+E+L G+DS D Sbjct 672 ENEWKHISEELLFGDDSAD 690 Lambda K H 0.316 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 61001067300 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40