bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0310_orf1 Length=164 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_840 117 9e-26 > 5807.cgd6_840 Length=408 Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 0/118 (0%) Query 14 CLVSLTLFYSCFVCLAVVMVTPWLYPLPVLLQMGLYTAPILYVGSHLSLKQNEVDATTGE 73 C SL + ++ LA+ ++ PLP+++QM +YT+ I+Y+GS+LSL Q +D TGE Sbjct 6 CNKSLMAYCLSYLVLALAILITNFKPLPIIVQMLMYTSSIIYIGSYLSLSQTIIDPKTGE 65 Query 74 KLNKGEAMNRTDAMLFPVFGSIALFSLYLAYKFLGTVWVNMLLTLYLTGVGLLALGET 131 K E+++R DAM+FPV GS+ALFSLYLAYKFL WVN+LLT YL +G +AL ET Sbjct 66 KDRSTESLSRKDAMMFPVIGSVALFSLYLAYKFLPVYWVNLLLTSYLFIIGAVALMET 123 Lambda K H 0.325 0.138 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28631644438 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40