bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0293_orf2
Length=485
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd4_3090 63.2 2e-08
> 5807.cgd4_3090
Length=538
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 139/387 (35%), Gaps = 51/387 (13%)
Query 112 VLQCPDHYITVCKKKDGAESPCCAKPQTAEKIARCPDGTEFQDGHCTRLLAHQPVAECPL 171
+++CP Y K+ C + CP E ++G C R V C
Sbjct 55 IIECPQGYTISGKQ--------CTRTIFVPSSVNCPKKYELREGQCVRKEYSSAVLVCEP 106
Query 172 GFGLSEHGTQCIKEELGMPAPTCVPPDVLSPEGDSCITTTEQGFEYVCPDEYECISHTIK 231
GF L G +CI + C P + G+ CI+ E +Y CP ++ +
Sbjct 107 GFELI--GGRCITRQSVQAERIC--PHGFALAGEECISMKEFAADYRCPPGFQ------R 156
Query 232 KKKKYSPLCSACAKTTEALPNCGCPEGLQEVDGFCYEPDIYALCQSRRAVPRKQAPSKKQ 291
K ++ C + P CP G + VD + KQ +
Sbjct 157 KHQE-------CVRDISTDPLESCPPGFEPVDKHGRMVQCTRTETVDVILSCKQGYELRG 209
Query 292 PVYPSKEAPEPEIDCKP---VGPVTCECALPFSL--EC-AGDLCR---CLHRQVLPTMPI 342
+ + P + C+ + C L +C AG + R C+ +P +P
Sbjct 210 DICVLVDIIRPNLKCEKGFQLKDGVCNRLLQVDSLSQCPAGSIPRGHKCIVITNVPIIPS 269
Query 343 CRG--EIDEAGN-CLTQAKKRLLYTCPEGFTCDVVDKKGQCQCTRVVVAEPLSRCLTGEP 399
C E+D G C+ ++ ++ CP+GF K QC + EP C G
Sbjct 270 CPSDFELDSTGTRCIRMDERPIIQECPQGF------KLESGQCVSISNVEPEVSCPPGST 323
Query 400 ---HDNKCIEVIREEKVVECPPGYTEKCCDNQCSCTKTHLAVRQVKCEDGAVSIQGQCAY 456
H NKC +I E+ +++CP GY E C + V C G QC
Sbjct 324 PHGHHNKCFNIITEQPMMQCPHGYIE---SGNGECISEKMKPASVDCPIGFSRQGSQCVK 380
Query 457 VSK--PSPGCFEGTLRGDRCIQEYIVP 481
+ PS C G L+ RC+ P
Sbjct 381 IISEVPSKSCPSGILKNHRCVSFETAP 407
Lambda K H
0.321 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 207444399717
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40