bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0293_orf2 Length=485 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_3090 63.2 2e-08 > 5807.cgd4_3090 Length=538 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 90/387 (23%), Positives = 139/387 (35%), Gaps = 51/387 (13%) Query 112 VLQCPDHYITVCKKKDGAESPCCAKPQTAEKIARCPDGTEFQDGHCTRLLAHQPVAECPL 171 +++CP Y K+ C + CP E ++G C R V C Sbjct 55 IIECPQGYTISGKQ--------CTRTIFVPSSVNCPKKYELREGQCVRKEYSSAVLVCEP 106 Query 172 GFGLSEHGTQCIKEELGMPAPTCVPPDVLSPEGDSCITTTEQGFEYVCPDEYECISHTIK 231 GF L G +CI + C P + G+ CI+ E +Y CP ++ + Sbjct 107 GFELI--GGRCITRQSVQAERIC--PHGFALAGEECISMKEFAADYRCPPGFQ------R 156 Query 232 KKKKYSPLCSACAKTTEALPNCGCPEGLQEVDGFCYEPDIYALCQSRRAVPRKQAPSKKQ 291 K ++ C + P CP G + VD + KQ + Sbjct 157 KHQE-------CVRDISTDPLESCPPGFEPVDKHGRMVQCTRTETVDVILSCKQGYELRG 209 Query 292 PVYPSKEAPEPEIDCKP---VGPVTCECALPFSL--EC-AGDLCR---CLHRQVLPTMPI 342 + + P + C+ + C L +C AG + R C+ +P +P Sbjct 210 DICVLVDIIRPNLKCEKGFQLKDGVCNRLLQVDSLSQCPAGSIPRGHKCIVITNVPIIPS 269 Query 343 CRG--EIDEAGN-CLTQAKKRLLYTCPEGFTCDVVDKKGQCQCTRVVVAEPLSRCLTGEP 399 C E+D G C+ ++ ++ CP+GF K QC + EP C G Sbjct 270 CPSDFELDSTGTRCIRMDERPIIQECPQGF------KLESGQCVSISNVEPEVSCPPGST 323 Query 400 ---HDNKCIEVIREEKVVECPPGYTEKCCDNQCSCTKTHLAVRQVKCEDGAVSIQGQCAY 456 H NKC +I E+ +++CP GY E C + V C G QC Sbjct 324 PHGHHNKCFNIITEQPMMQCPHGYIE---SGNGECISEKMKPASVDCPIGFSRQGSQCVK 380 Query 457 VSK--PSPGCFEGTLRGDRCIQEYIVP 481 + PS C G L+ RC+ P Sbjct 381 IISEVPSKSCPSGILKNHRCVSFETAP 407 Lambda K H 0.321 0.137 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 207444399717 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40