bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0280_orf3 Length=198 Score E Sequences producing significant alignments: (Bits) Value 31033.SINFRUP00000127630 283 3e-75 > 31033.SINFRUP00000127630 Length=396 Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 125/192 (65%), Positives = 164/192 (85%), Gaps = 1/192 (0%) Query 6 VFERNQEATLYVGNIDAQVDEDLLWELFTQAGVVRLVNIPKDKVTGAHQGYAFVEFESET 65 + ERNQ+AT+YVG +D +V E LLWELF QAG V ++PKD+VTG HQGY FVEF SE Sbjct 6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65 Query 66 DADFALKLMGMVKLYGKPLRLSKAAHDRRTFDVGANLFVGNLDPDLDEKVLFDTFSSFGN 125 DAD+A+K+M M+KLYGKP+R++KA+ + DVGAN+F+GNLDP++DEK+L+DTFS+FG Sbjct 66 DADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGV 125 Query 126 VV-SAKVMRDPETGVSKGFAFVSMESFEASDAALAAMNGQFLCNRPVHVSYAYKKDTRGE 184 ++ + K+MRDP+TG SKG+AF++ SF+ASDAA+ AMNGQ+LCNRP+ VSYA+KKD++GE Sbjct 126 ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGE 185 Query 185 RHGSAAERLLAA 196 RHGSAAERLLAA Sbjct 186 RHGSAAERLLAA 197 Lambda K H 0.319 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 46549540124 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40