bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0246_orf1
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT4G40030.2 262 2e-69
> 3702.AT4G40030.2
Length=164
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/135 (95%), Positives = 132/135 (97%), Gaps = 0/135 (0%)
Query 19 MARTKQTARKSTGGKAPRKQLATKAARKSAPVAGGVKKPHRYRPGTVALREIRKFQKSTD 78
MARTKQTARKSTGGKAPRKQLATKAARKSAP GGVKKPHRYRPGTVALREIRK+QKST+
Sbjct 29 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 88
Query 79 LLIRKLPFQRLVREIAQDFKTDLRFQSQAILALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
LLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct 89 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 148
Query 139 MPKDIQLARRIRGER 153
MPKDIQLARRIRGER
Sbjct 149 MPKDIQLARRIRGER 163
Lambda K H
0.324 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23213563385
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40