bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0231_orf2 Length=205 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0391 306 2e-82 > 5833.PF14_0391 Length=217 Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 144/205 (70%), Positives = 175/205 (85%), Gaps = 0/205 (0%) Query 1 IASILKGSQEKKRKFVETIELQISLKDYDTQRDKRFSGSVRLPHVPRAKSKVCVIGDAVH 60 I+ + +G+++KKRKFVETIELQI LKDYDTQRDKRFSG+VRL + R K KVC++GDAVH Sbjct 13 ISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKKLKVCILGDAVH 72 Query 61 MEEAKALGLDCMDIEALKKINKNKKIVKKLARKYDAFLASQALIPQIPRYLGPGLNKAGK 120 +EEA+ L LD MDIEA+KK+NK+K +VKKLA+KYDAFLASQ ++PQIP+ LGPGLNKAGK Sbjct 73 VEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQIPKLLGPGLNKAGK 132 Query 121 FPTLITHQDKIEDKILEVRSSVKFQLKKVLCMGVAVANVEMTEAQVRYNLTMAINFLVSL 180 FP+LITH DKI DKILE++SS+KFQLKKVLCMGV V + + E ++R N+ AINFLVSL Sbjct 133 FPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELRSNIVHAINFLVSL 192 Query 181 LKKNWNNVKRLHIKSTMGKCHTIYG 205 LKKNW N++ LHIKSTMGK IYG Sbjct 193 LKKNWQNIRTLHIKSTMGKPQRIYG 217 Lambda K H 0.320 0.135 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 50836997767 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40