bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0218_orf4 Length=844 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000009965 62.4 7e-08 > 69293.ENSGACP00000009965 Length=370 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 90/351 (25%), Positives = 137/351 (39%), Gaps = 67/351 (19%) Query 404 CAGCMKKGVEYNGEIIRELTTAVETEEECQLHCQAISTCAVFSY---------RGSFCRL 454 C + + V++ G I+ + + CQ C C FS+ R +C L Sbjct 22 CRQQLLEDVDFPGSDIQFVFSP--DVNHCQQLCTQHPACLFFSFLRAEWTRDDRNFYCYL 79 Query 455 --IGRDATTEQSPL--ATSG--TKHCAGD---CYLQ---GVHSPRRDYGYVKELSGKTAE 502 Q+P+ TSG K C+ D C Q GV P DY K L + AE Sbjct 80 KTTSSGEPDVQNPVEGITSGYSLKPCSPDSKPCLPQLYNGVDFPGADY---KALFTEDAE 136 Query 503 QCRDTCKADEKCTSFTHWNDK--------RCYLKDDESFRYLSPIE---GAVTGF----- 546 +CR C D C FT N+ +C+LK L +E G V+GF Sbjct 137 ECRRACTQDPACQFFTFLNEDFTPDVYRYKCHLKFSWPVATLPVVERTAGLVSGFSNKVE 196 Query 547 ------PTCSICMREGVRILANDSNLLWNLEAGNAEECKIRCGLMSSCTRFAFNIVTKQC 600 P C + I ND + +L A + C+ C S CT F+F C Sbjct 197 TFQEGKPACQGKLFPNTNIPGND---ILDLPAASPGHCQNLCSAHSVCTAFSFVSDNFNC 253 Query 601 SL-LSGEGELVEARDYVSG--PAK-CLTDISCFQR---DVAFTGGETVATDVTENAGLCM 653 L ++ + ++ A+D ++ PA+ C D S V F G + + ++ ++A C Sbjct 254 YLKVNDDALILTAKDRITSGLPARFCQPDNSWVNNALERVDFRGSD-IRYELMDDAVSCQ 312 Query 654 RWCAKEAQCTHFTFT---FAEDRLSGQCTL-----LKGDLNVTKTKGAVSG 696 R C + C +T+ F + + +C L + VTK VSG Sbjct 313 RTCNVDPNCQFYTYVNKDFPDSNIRRRCHLKRSITMPAPPRVTKLANVVSG 363 Lambda K H 0.319 0.133 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 406698079963 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40