bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0214_orf1 Length=173 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0160 170 1e-41 > 5833.PF11_0160 Length=810 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 87/190 (45%), Positives = 112/190 (58%), Gaps = 19/190 (10%) Query 1 GEADAFVLKARRALPAEGEITISYIGDEDLLKSTNIRRDKLSGWLFTCYCTRCIDTSDPA 60 GE D+FVL+AR L EITISY+GD+DL KS+NIRR+KL+ WLF C C+RC D Sbjct 528 GENDSFVLRARINLNPGDEITISYLGDDDLYKSSNIRREKLTNWLFVCMCSRCTHPVDNC 587 Query 61 RGFRCPACGTG-----------------TMQFKTE--QDETTANPCTVCGTVADASTVER 101 RGFRC +CG G T K+E D + C VC S Sbjct 588 RGFRCSSCGIGKKKKKKKKKKKKKKLECTFFIKSEYHDDIPIISKCNVCLCEITESAAYE 647 Query 102 YLTFEAAYAERLDETNREDMKDAEMVYEQASRVFTSHWILFQLNTILFEGYRAAGDYESA 161 Y+ +E +Y ERL ET++ D+ DA V+ QA ++FT HWI+FQL TILFEGYR +E A Sbjct 648 YIEYENSYIERLQETDKNDLSDALAVFVQADKIFTQHWIMFQLYTILFEGYRDTSQWEKA 707 Query 162 YVHQMHRLEY 171 +QM R++Y Sbjct 708 IYYQMQRIKY 717 Lambda K H 0.320 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 33476963958 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40