bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0206_orf3 Length=271 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000015855 100 5e-20 > 8090.ENSORLP00000015855 Length=1526 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 58/153 (37%), Positives = 76/153 (49%), Gaps = 16/153 (10%) Query 24 NECATNRGNCDENSDCINLDGAEQLCKCHKGWTGNGDKPGVACRDINECNENPAICPSNS 83 N C T R CD N+ C G++ C+C G+ NG C DI+EC ENP IC N+ Sbjct 707 NPCFTGRHGCDNNAVCRPGQGSQFTCECAAGFLDNGRN----CDDIDECRENPQICGYNA 762 Query 84 ICTNLAGSYKCECGPGFEPDSSGSGCVTED----FCGTGKNDCDTV-FAACSLV-PGSFK 137 +C N G+Y+CEC GF+ S G CV D C G +DCD A CS SF Sbjct 763 VCNNQPGTYRCECEDGFQFGSDGRTCVEVDRPVNHCEEGTHDCDAPERAQCSYTGSSSFI 822 Query 138 CECIQGFRGVG------TVNTCEPLAGNEDLAC 164 C C+ GF G G ++ C+ ++D C Sbjct 823 CSCLPGFVGDGRNCQVEDIDECQSRRCHQDADC 855 Lambda K H 0.318 0.136 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 87371322525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40