bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0204_orf1 Length=220 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0071 249 6e-65 > 5833.PF08_0071 Length=198 Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 120/198 (60%), Positives = 141/198 (71%), Gaps = 2/198 (1%) Query 21 MPFQLPPLPYAKDALEPHISKETLEYHYGKHHATYVNNLNRLTEGKDEASKSLEDLIKTA 80 M LP L YA +AL PHIS+ETL +HY KHHA YVN LN L + A KSL D++K + Sbjct 1 MVITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAEKSLLDIVKES 60 Query 81 SGGILNNAGQVYNHTFYWNSMKAGGGGSPTGLIAGEIEKSFSSFEAFKEQFSAAAAGHFG 140 SG I NNA Q++NHTFYW+SM GG P G I +I++ F SF FKEQFS GHFG Sbjct 61 SGAIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFG 120 Query 141 SGWVWLCYCGEQKKVVITQTHDGGVPFRDNSKCFPLLACDVWEHAYYIDRRNDRAAYVKA 200 SGW WL K+VI QTHD G P +DN+ P+L CD+WEHAYYID RNDRA+YVKA Sbjct 121 SGWGWLA-LNNNNKLVILQTHDAGNPIKDNTG-IPILTCDIWEHAYYIDYRNDRASYVKA 178 Query 201 WWSLVNWDFANENLKKAM 218 WW+LVNW+FANENLKKAM Sbjct 179 WWNLVNWNFANENLKKAM 196 Lambda K H 0.316 0.132 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 59171035281 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40