bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0184_orf1 Length=139 Score E Sequences producing significant alignments: (Bits) Value 59463.ENSMLUP00000009187 161 5e-39 > 59463.ENSMLUP00000009187 Length=539 Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 0/139 (0%) Query 1 ALPNLLSLLSSNRKTVQKEACWTISNITAGNQEQIQEVLESGAVPALLHLLETADFDTKK 60 ALP LL LLSS +++++KEACWT+SNITAGN+ QIQ V+++ P L+ +L+ A+F T+K Sbjct 340 ALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQSVIDANIFPVLIEILQKAEFRTRK 399 Query 61 EAAWAVSNAVSGGSDMQVAELVRLGCAPPLCQLLGCMDSKIVMVSLEALHAILRTGKKIK 120 EAAWA++NA SGG+ Q+ LV LGC PLC LL MDSKIV V+L L ILR G++ Sbjct 400 EAAWAITNATSGGTPEQIKYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQES 459 Query 121 ETEGLSINPYATLIEQADG 139 + G+ INPY LIE+A G Sbjct 460 KQNGMGINPYCALIEEAYG 478 Lambda K H 0.314 0.129 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23001752095 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40