bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0183_orf5 Length=274 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.104 381 1e-104 > 5833.MAL8P1.104 Length=1774 Score = 381 bits (979), Expect = 1e-104, Method: Composition-based stats. Identities = 180/256 (70%), Positives = 219/256 (85%), Gaps = 1/256 (0%) Query 19 RGQIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDL 78 R +I++VWA+NLEEE +RIRD+VE++PY+A+DTEFPGIVARPT N LDYNY+T+K NVDL Sbjct 4 RTKIVDVWANNLEEEFERIRDIVEKHPYVAIDTEFPGIVARPTGNVLDYNYQTIKCNVDL 63 Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138 LKVIQLG+TF++ +G + TWQFNF+FDL+ DMYAQNSIDFLK SGI+F+K Q G+ Sbjct 64 LKVIQLGVTFSNGKGEMPN-VSTWQFNFKFDLDSDMYAQNSIDFLKLSGINFEKHQSLGI 122 Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198 E+ FGE+IM+SGLVMNEDVKWISFHGCYDF YLLK+LTC ALP +E AFFEL+ DFFPS Sbjct 123 ELLHFGEVIMSSGLVMNEDVKWISFHGCYDFAYLLKILTCSALPHNEAAFFELLNDFFPS 182 Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258 LYDIK+LL +L LS+ SLQK+SE L+V+RIG QHQAGSDSLVTC+TFF L+E YFD Sbjct 183 LYDIKYLLLNLNIKQLSRTFSLQKISEILSVKRIGRQHQAGSDSLVTCKTFFKLMEMYFD 242 Query 259 GKIDEAKFSGVIYGLG 274 KID+ K+SG+IYGLG Sbjct 243 NKIDDKKYSGIIYGLG 258 Lambda K H 0.322 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 89179005060 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40