bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0170_orf2
Length=464
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0465 504 2e-141
> 5833.PF11_0465
Length=837
Score = 504 bits (1298), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 296/366 (80%), Gaps = 2/366 (0%)
Query 99 LESQMYHQLRKLINVVDELRDCGVQQWIQLPRICVLGTQSAGKSSVLEAIVGVDFLPRGD 158
+E+ MY+ LRKLINV+DELRD G+Q++I LPRICV+GTQS+GKSSVLE+IVG+DFLPRG+
Sbjct 1 METSMYNNLRKLINVIDELRDIGLQKYINLPRICVVGTQSSGKSSVLESIVGMDFLPRGE 60
Query 159 GVVTRRPLELRLVHLPESEHGPEEAFAVFDNCKDRKFKNFDEVRAEIERLTDEVAGKNKG 218
G+VTRRP+E RL+H+ E + +AVF+N K++K+ +F+EVR +I RLTDE+AGKNKG
Sbjct 61 GIVTRRPIEFRLIHIKEDSEI--KYWAVFENEKNKKYTDFNEVREQINRLTDEIAGKNKG 118
Query 219 IVDSPIVLTVYATRCPDLSLIDLPGITRVPLKGSDQSDDIEALTRQMALRYAADPRTIIL 278
I+D PIVL +Y+ +CPDLSLIDLPGITRVPLK SDQ+DDIE LTR MALRY DPRTIIL
Sbjct 119 IIDEPIVLNIYSIKCPDLSLIDLPGITRVPLKNSDQTDDIERLTRDMALRYVKDPRTIIL 178
Query 279 AVLPANADMSTSDALQLARRVDPRGVRTIGVITKVDLMDSGTDACKMLLGEEIPLRLGYT 338
AVLPANADMSTSDALQ+AR+VDP+G+RTIGVITK+DLMD G DA KMLL +EI LRLGYT
Sbjct 179 AVLPANADMSTSDALQIARKVDPKGLRTIGVITKIDLMDKGADASKMLLNDEINLRLGYT 238
Query 339 GVKNRSQADIKAGKSVQSCLEDERQYFKTHPVYGHMGAQYWGIPSLVEKLTRVLFLHIKH 398
GV NRS ADIK GK++ L+DE ++F+ HPVY + +G SL +KLT+VL HIK+
Sbjct 239 GVVNRSTADIKKGKTISQALKDELEFFQKHPVYKKLPPALYGTNSLTDKLTKVLLRHIKN 298
Query 399 VLPEIRKEIQVKARGVQTRIQELGEGVPSESRDRAQLLWTAITDYVEVIKSAIRGKYDKR 458
LP+I+ EI K R + ++ ELG VP ++ + QLLW+ ITDY E+ K+ ++GKYDKR
Sbjct 299 FLPDIKIEINDKIRYINDKLYELGTNVPLDATKKTQLLWSMITDYCEIFKNTLKGKYDKR 358
Query 459 LQKYFD 464
+Q + +
Sbjct 359 VQVFIE 364
Lambda K H
0.321 0.139 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 195103514748
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40