bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0170_orf2 Length=464 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0465 504 2e-141 > 5833.PF11_0465 Length=837 Score = 504 bits (1298), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 232/366 (63%), Positives = 296/366 (80%), Gaps = 2/366 (0%) Query 99 LESQMYHQLRKLINVVDELRDCGVQQWIQLPRICVLGTQSAGKSSVLEAIVGVDFLPRGD 158 +E+ MY+ LRKLINV+DELRD G+Q++I LPRICV+GTQS+GKSSVLE+IVG+DFLPRG+ Sbjct 1 METSMYNNLRKLINVIDELRDIGLQKYINLPRICVVGTQSSGKSSVLESIVGMDFLPRGE 60 Query 159 GVVTRRPLELRLVHLPESEHGPEEAFAVFDNCKDRKFKNFDEVRAEIERLTDEVAGKNKG 218 G+VTRRP+E RL+H+ E + +AVF+N K++K+ +F+EVR +I RLTDE+AGKNKG Sbjct 61 GIVTRRPIEFRLIHIKEDSEI--KYWAVFENEKNKKYTDFNEVREQINRLTDEIAGKNKG 118 Query 219 IVDSPIVLTVYATRCPDLSLIDLPGITRVPLKGSDQSDDIEALTRQMALRYAADPRTIIL 278 I+D PIVL +Y+ +CPDLSLIDLPGITRVPLK SDQ+DDIE LTR MALRY DPRTIIL Sbjct 119 IIDEPIVLNIYSIKCPDLSLIDLPGITRVPLKNSDQTDDIERLTRDMALRYVKDPRTIIL 178 Query 279 AVLPANADMSTSDALQLARRVDPRGVRTIGVITKVDLMDSGTDACKMLLGEEIPLRLGYT 338 AVLPANADMSTSDALQ+AR+VDP+G+RTIGVITK+DLMD G DA KMLL +EI LRLGYT Sbjct 179 AVLPANADMSTSDALQIARKVDPKGLRTIGVITKIDLMDKGADASKMLLNDEINLRLGYT 238 Query 339 GVKNRSQADIKAGKSVQSCLEDERQYFKTHPVYGHMGAQYWGIPSLVEKLTRVLFLHIKH 398 GV NRS ADIK GK++ L+DE ++F+ HPVY + +G SL +KLT+VL HIK+ Sbjct 239 GVVNRSTADIKKGKTISQALKDELEFFQKHPVYKKLPPALYGTNSLTDKLTKVLLRHIKN 298 Query 399 VLPEIRKEIQVKARGVQTRIQELGEGVPSESRDRAQLLWTAITDYVEVIKSAIRGKYDKR 458 LP+I+ EI K R + ++ ELG VP ++ + QLLW+ ITDY E+ K+ ++GKYDKR Sbjct 299 FLPDIKIEINDKIRYINDKLYELGTNVPLDATKKTQLLWSMITDYCEIFKNTLKGKYDKR 358 Query 459 LQKYFD 464 +Q + + Sbjct 359 VQVFIE 364 Lambda K H 0.321 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 195103514748 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40