bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0164_orf1
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF1315w 78.6 5e-14
> 5833.PFF1315w
Length=1712
Score = 78.6 bits (192), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Query 3 QQQPHLQVVENAQGEKACEGKWILATQTQVLDCNKAEKTEGETPLLVCIRLRNDKIAKTI 62
Q H+ +EN + K + + +D N + GE PL++CIR RN+ +A I
Sbjct 1527 QNALHIACLENQE-------KIVHYLLSHNIDINCKDNINGECPLMICIRTRNENLALLI 1579
Query 63 LKKAKSIDLEAKDSQGRTALLAALFFGQYSVAATLMEMGADVMTQDEAGNTALAIANERL 122
L + K+I+ + G T+L+ ++F+G Y VA LM+ GADV +D G+ + +A ER+
Sbjct 1580 LNEGKNINYNLTNIHGETSLIYSIFYGLYDVADILMKRGADVSVRDINGDKSYNVACERV 1639
Query 123 LTPGSDKRVLRRFLRLYRSRDTSII 147
L+ + K+VL++FL+LYRS++ + +
Sbjct 1640 LSHKTCKKVLKKFLKLYRSQNKNFL 1664
Lambda K H
0.317 0.130 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22943761524
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40