bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0153_orf1
Length=207
Score E
Sequences producing significant alignments: (Bits) Value
44689.DDBDRAFT_0189390 91.3 2e-17
> 44689.DDBDRAFT_0189390
Length=719
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query 80 FQDIAPDAFECAREVAGISDQDYRTSLCST----DFPFIEFQSNSKSGQFFFFSHDGKFL 135
F+D P+AF R + GI D+ SLC+T + E + KSG FFFSHD KF+
Sbjct 378 FKDYCPNAFRYLRYLFGIDTADFMVSLCNTLKNGENALRELPTPGKSGSLFFFSHDMKFI 437
Query 136 IKTISKAEVIQILRVLPSYIDHILSTPLSLLTRIFGIHRVELYT 179
IKTI K E + +LPSY++HI S P SLL R FG++RV+ ++
Sbjct 438 IKTIPKDEAKLLRDILPSYLEHIQSNPNSLLPRFFGLYRVKPHS 481
Lambda K H
0.322 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 52061985665
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40