bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0150_orf2 Length=142 Score E Sequences producing significant alignments: (Bits) Value 33169.AGOS_ADL030C 165 4e-40 > 33169.AGOS_ADL030C Length=245 Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 75/108 (69%), Positives = 88/108 (81%), Gaps = 0/108 (0%) Query 35 MAIRAHCEASCEVGVFGRLTNSYCLVSCGGSENFYSLLEAELGPHIPVVHASIAGTAVVG 94 MA R E S EVGVF +LTN+YCLV+ GGSENFYS EAELG IP+VH +IAGT +VG Sbjct 1 MATRTQFENSNEVGVFSKLTNTYCLVTIGGSENFYSAFEAELGDAIPIVHTTIAGTRIVG 60 Query 95 SVSVGNKHGLLVPSTTTDLELQHLRNSLPDSVKIRRVEERLSALGNCV 142 ++ GN+ GLLVP+ TTD ELQHLRNSLPDSVKI+R+EERLSALGN + Sbjct 61 RMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRIEERLSALGNVI 108 Lambda K H 0.325 0.134 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22741008115 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40