bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0127_orf1 Length=271 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0318 194 3e-48 > 5833.PF13_0318 Length=180 Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/157 (60%), Positives = 118/157 (75%), Gaps = 5/157 (3%) Query 59 SVMASASTEK---KKVHLRKAAGHIWSDPTLDEWTENDHRVFCGDLGNEVTDEVLASAFR 115 S M ++ EK KK HLRKAAG +W DPTLDEW END R+FCG+LGNEV+ ++LA+AFR Sbjct 12 SDMTTSKDEKSNNKKPHLRKAAGIVWKDPTLDEWPENDFRIFCGNLGNEVSSDILANAFR 71 Query 116 KYKSFDKARVVRDKRTGKTKGYGFVSFMDPNDMLKAIKEMNYKYVGNRPIRVLRSKWKDR 175 KYKSF+ A+V+RDKR KTKGYGFVS DP DML A+K MN K++GNRPI V RS+WKDR Sbjct 72 KYKSFNMAKVIRDKRNNKTKGYGFVSLSDPQDMLDALKTMNNKFIGNRPITVKRSRWKDR 131 Query 176 EIDSQRNKQIAGIVKKVEKNDSKTLRKFKKLGVNING 212 E++SQ+NK +K + +K RKFKK+ VN N Sbjct 132 EMNSQKNKDFDNFLKNSQL-PTKKFRKFKKI-VNNNA 166 Lambda K H 0.316 0.129 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 87371322525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40