bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0098_orf6 Length=580 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G00900.1 562 1e-158 > 3702.AT4G00900.1 Length=1054 Score = 562 bits (1448), Expect = 1e-158, Method: Compositional matrix adjust. Identities = 319/592 (53%), Positives = 399/592 (67%), Gaps = 30/592 (5%) Query 3 GMATQIGLIQAAVHEAGESDDTQSPLQQKLDEFGEALSKVICAVCVVVWLINIGHF--SD 60 GM T+IG IQ +HEA +++++PL++KLDEFG L+ IC VCV+VW+IN +F D Sbjct 234 GMDTEIGKIQRQIHEAS-LEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWD 292 Query 61 AVHGS-------ALRGCIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRR 113 V G + C YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA+KNAIVR+ Sbjct 293 VVDGYKPVNIKFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRK 352 Query 114 LQSVETLGCTTVICSDKTGTLTTNEMTCVRFCVVGQSSTEVDVFTVDGTGFCATGSVSRE 173 L SVETLGCTTVICSDKTGTLTTN+M+ F +G +T VF+V GT + + Sbjct 353 LPSVETLGCTTVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTY--------D 404 Query 174 MRGGAKGSQSLTGHQAVLSWLCRCATICNEAHLNVAPGSSEGSHYERMGEPTEAALLVLV 233 + G A L + +ICN+A + EG + G PTEAAL VLV Sbjct 405 PKDGGIVDWGCNNMDANLQAVAEICSICNDAGV-----FYEGKLFRATGLPTEAALKVLV 459 Query 234 EKLGL---FSDEQISRRANTKRTAAN-PTPFCDYWKGEYKDLATLEFSRDRKSMSVLSRN 289 EK+G+ + E I N ++ CD+W K +ATLEF R RKSMSV+ + Sbjct 460 EKMGIPEKKNSENIEEVTNFSDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIV-S 518 Query 290 SKTKRNELFVKGAPETLLTRCETMMLPNGDVVPMSEAARKVVLTDVAGMARGALRTLALA 349 +N L VKGA E++L R L +G +V + E++R+V+L + M LR L LA Sbjct 519 EPNGQNRLLVKGAAESILERSSFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLA 578 Query 350 VRLDAGPLADYGGETTQASRSLLEDQAGYAALESSLCFIGVVGLFDPPRPEVGSAILQCR 409 + + G +DY E + + LL D + Y+ +E++L F+GVVGL DPPR EVG AI CR Sbjct 579 YKDELGEFSDYSSEEHPSHKKLL-DPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCR 637 Query 410 DAGIRVVMITGDNKDTAEAVA-DLVHIREGFDKTFPSYTGKEFEALSASEKMRVLSSPGG 468 DAGIRV++ITGDNK TAEA+ ++ E D + S+TGKEF +L AS + +LS GG Sbjct 638 DAGIRVMVITGDNKSTAEAICCEIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGG 697 Query 469 AIFSRTEPKHKQLIVKLLKELGETTAMTGDGVNDAPALKQADIGVAMGIAGTEVAKEASD 528 +FSR EP+HKQ IV++LKE+GE AMTGDGVNDAPALK ADIG+AMGI GTEVAKEASD Sbjct 698 KVFSRAEPRHKQEIVRMLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASD 757 Query 529 MVLADDNFSTIVSAVEEGRSIYNNMKAFIRYLISSNIGEVASIFMTAALGVP 580 MVLADDNFSTIVSAV EGRSIYNNMKAFIRY+ISSN+GEV SIF+TAALG+P Sbjct 758 MVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIP 809 Lambda K H 0.318 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 259881808102 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40