bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0098_orf6
Length=580
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT4G00900.1 562 1e-158
> 3702.AT4G00900.1
Length=1054
Score = 562 bits (1448), Expect = 1e-158, Method: Compositional matrix adjust.
Identities = 319/592 (53%), Positives = 399/592 (67%), Gaps = 30/592 (5%)
Query 3 GMATQIGLIQAAVHEAGESDDTQSPLQQKLDEFGEALSKVICAVCVVVWLINIGHF--SD 60
GM T+IG IQ +HEA +++++PL++KLDEFG L+ IC VCV+VW+IN +F D
Sbjct 234 GMDTEIGKIQRQIHEAS-LEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWD 292
Query 61 AVHGS-------ALRGCIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRR 113
V G + C YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA+KNAIVR+
Sbjct 293 VVDGYKPVNIKFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRK 352
Query 114 LQSVETLGCTTVICSDKTGTLTTNEMTCVRFCVVGQSSTEVDVFTVDGTGFCATGSVSRE 173
L SVETLGCTTVICSDKTGTLTTN+M+ F +G +T VF+V GT + +
Sbjct 353 LPSVETLGCTTVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTY--------D 404
Query 174 MRGGAKGSQSLTGHQAVLSWLCRCATICNEAHLNVAPGSSEGSHYERMGEPTEAALLVLV 233
+ G A L + +ICN+A + EG + G PTEAAL VLV
Sbjct 405 PKDGGIVDWGCNNMDANLQAVAEICSICNDAGV-----FYEGKLFRATGLPTEAALKVLV 459
Query 234 EKLGL---FSDEQISRRANTKRTAAN-PTPFCDYWKGEYKDLATLEFSRDRKSMSVLSRN 289
EK+G+ + E I N ++ CD+W K +ATLEF R RKSMSV+ +
Sbjct 460 EKMGIPEKKNSENIEEVTNFSDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIV-S 518
Query 290 SKTKRNELFVKGAPETLLTRCETMMLPNGDVVPMSEAARKVVLTDVAGMARGALRTLALA 349
+N L VKGA E++L R L +G +V + E++R+V+L + M LR L LA
Sbjct 519 EPNGQNRLLVKGAAESILERSSFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLA 578
Query 350 VRLDAGPLADYGGETTQASRSLLEDQAGYAALESSLCFIGVVGLFDPPRPEVGSAILQCR 409
+ + G +DY E + + LL D + Y+ +E++L F+GVVGL DPPR EVG AI CR
Sbjct 579 YKDELGEFSDYSSEEHPSHKKLL-DPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCR 637
Query 410 DAGIRVVMITGDNKDTAEAVA-DLVHIREGFDKTFPSYTGKEFEALSASEKMRVLSSPGG 468
DAGIRV++ITGDNK TAEA+ ++ E D + S+TGKEF +L AS + +LS GG
Sbjct 638 DAGIRVMVITGDNKSTAEAICCEIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGG 697
Query 469 AIFSRTEPKHKQLIVKLLKELGETTAMTGDGVNDAPALKQADIGVAMGIAGTEVAKEASD 528
+FSR EP+HKQ IV++LKE+GE AMTGDGVNDAPALK ADIG+AMGI GTEVAKEASD
Sbjct 698 KVFSRAEPRHKQEIVRMLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASD 757
Query 529 MVLADDNFSTIVSAVEEGRSIYNNMKAFIRYLISSNIGEVASIFMTAALGVP 580
MVLADDNFSTIVSAV EGRSIYNNMKAFIRY+ISSN+GEV SIF+TAALG+P
Sbjct 758 MVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIP 809
Lambda K H
0.318 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 259881808102
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40