bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0083_orf2
Length=245
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G26560.1 357 2e-97
> 3702.AT3G26560.1
Length=1168
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/245 (68%), Positives = 207/245 (84%), Gaps = 1/245 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L+RAAA +L KERR++R+ Q+ +LDSIPKD++RPWEDP P+ GER +AQ L+G+G +
Sbjct 423 LSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLS 482
Query 61 GYEMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGS 120
Y+MPEWKK GK +FG +S LSI EQR SLPI+KLK++L++A+ +NQVL+VIGETGS
Sbjct 483 AYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGS 542
Query 121 GKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDC 180
GKTTQ+TQY+AEAG T G+ IGCTQPRRVAAMSVAKRVAEEFGCRLG+EVGY+IRFEDC
Sbjct 543 GKTTQVTQYLAEAGYTTKGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 601
Query 181 TSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDF 240
T DT+IKYMTDG+LLRE L+D L +YSV+MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 602 TGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDL 661
Query 241 KLIVT 245
+LIVT
Sbjct 662 RLIVT 666
Lambda K H
0.319 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 72605294520
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40