bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0083_orf2 Length=245 Score E Sequences producing significant alignments: (Bits) Value 3702.AT3G26560.1 357 2e-97 > 3702.AT3G26560.1 Length=1168 Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 168/245 (68%), Positives = 207/245 (84%), Gaps = 1/245 (0%) Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60 L+RAAA +L KERR++R+ Q+ +LDSIPKD++RPWEDP P+ GER +AQ L+G+G + Sbjct 423 LSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLS 482 Query 61 GYEMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGS 120 Y+MPEWKK GK +FG +S LSI EQR SLPI+KLK++L++A+ +NQVL+VIGETGS Sbjct 483 AYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGS 542 Query 121 GKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDC 180 GKTTQ+TQY+AEAG T G+ IGCTQPRRVAAMSVAKRVAEEFGCRLG+EVGY+IRFEDC Sbjct 543 GKTTQVTQYLAEAGYTTKGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 601 Query 181 TSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDF 240 T DT+IKYMTDG+LLRE L+D L +YSV+MLDEAHERTI TDVLFGLLK+ ++R D Sbjct 602 TGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDL 661 Query 241 KLIVT 245 +LIVT Sbjct 662 RLIVT 666 Lambda K H 0.319 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 72605294520 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40