bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0075_orf4 Length=299 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0274 128 2e-28 > 5833.PF13_0274 Length=884 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 57/298 (19%) Query 2 LHRQLVCILTKEVERTLLIRPSFDVRPLMGGTDGIFRGLHRHYFNSMLSVLLPMLLESNC 61 ++ Q++ +LTK ++++ I+PSFD+R L+ G D LL L S+C Sbjct 576 IYSQIISLLTKSIDKSFQIKPSFDIRYLLDGAD-----------------LLMCNLISSC 618 Query 62 TAAATAAPGAGAATPSTAAEQLHQQQQQQEQQSAALSISGAFEALPLSGTMRHIAMTAVK 121 + S+ FE LPL R+ + Sbjct 619 SKNL-------------------------------YSLLDGFEPLPLKPDYRNKVHNLIS 647 Query 122 NSPTPNVLASMLLAEQRVVSLSYAKGYELSPTDVCLLTNFVSSSLALRQLESFTPLCLPS 181 + NVL S L+ + +++ LS +K Y L+ D+ +L N ++S + + ES+TP+CLP Sbjct 648 SFKINNVLLSFLIIDDKIIGLSLSK-YTLNSMDIIILINMITSMKSFKNAESWTPICLPI 706 Query 182 INDRGFLHAYVRYLTPRLAFVCLSSPADSIRFHHLANHCNKLFAMLTNTGCLAAIETSLE 241 N FL+AY+ Y+ ++ V + S A S F HL+ H + + + L +TGC I + Sbjct 707 YNPNLFLYAYINYIKKKICCVYICSHASSRDFFHLSRHTSMIESTLISTGCYDEIVKASN 766 Query 242 YAPYALPRCLWGEIALVHCALFVPSLSQYFSSAFGDDYKTDLSKQQRVYTLYASAAEL 299 AP+ LP+ + G I ++H ++P+L QY+SS +D K +R++ +Y ++ Sbjct 767 NAPFVLPQ-IPG-IDIIHLCYYIPNLKQYYSSKISND------KIKRIFRVYQKCDDI 816 Lambda K H 0.322 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103213341868 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40