bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0075_orf4
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0274 128 2e-28
> 5833.PF13_0274
Length=884
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 57/298 (19%)
Query 2 LHRQLVCILTKEVERTLLIRPSFDVRPLMGGTDGIFRGLHRHYFNSMLSVLLPMLLESNC 61
++ Q++ +LTK ++++ I+PSFD+R L+ G D LL L S+C
Sbjct 576 IYSQIISLLTKSIDKSFQIKPSFDIRYLLDGAD-----------------LLMCNLISSC 618
Query 62 TAAATAAPGAGAATPSTAAEQLHQQQQQQEQQSAALSISGAFEALPLSGTMRHIAMTAVK 121
+ S+ FE LPL R+ +
Sbjct 619 SKNL-------------------------------YSLLDGFEPLPLKPDYRNKVHNLIS 647
Query 122 NSPTPNVLASMLLAEQRVVSLSYAKGYELSPTDVCLLTNFVSSSLALRQLESFTPLCLPS 181
+ NVL S L+ + +++ LS +K Y L+ D+ +L N ++S + + ES+TP+CLP
Sbjct 648 SFKINNVLLSFLIIDDKIIGLSLSK-YTLNSMDIIILINMITSMKSFKNAESWTPICLPI 706
Query 182 INDRGFLHAYVRYLTPRLAFVCLSSPADSIRFHHLANHCNKLFAMLTNTGCLAAIETSLE 241
N FL+AY+ Y+ ++ V + S A S F HL+ H + + + L +TGC I +
Sbjct 707 YNPNLFLYAYINYIKKKICCVYICSHASSRDFFHLSRHTSMIESTLISTGCYDEIVKASN 766
Query 242 YAPYALPRCLWGEIALVHCALFVPSLSQYFSSAFGDDYKTDLSKQQRVYTLYASAAEL 299
AP+ LP+ + G I ++H ++P+L QY+SS +D K +R++ +Y ++
Sbjct 767 NAPFVLPQ-IPG-IDIIHLCYYIPNLKQYYSSKISND------KIKRIFRVYQKCDDI 816
Lambda K H
0.322 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 103213341868
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40