bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0074_orf4 Length=354 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0157 270 6e-71 > 5833.PF11_0157 Length=390 Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 136/309 (44%), Positives = 205/309 (66%), Gaps = 6/309 (1%) Query 2 LTDWINIHHENRKYLPGFELPSNLRAVPSLTDACRDADLLVFVMPHQFIERACRELRKAK 61 L+D IN EN KY+ G ++P N+ A+ +L + DADLL+FV+PHQ+++ E+ + Sbjct 84 LSDIINKKKENIKYMKGMKIPENILAISNLKEVIDDADLLIFVLPHQYLDNVLDEIVQNN 143 Query 62 LLPPHCRAISLIKGIGVRNGWPITLTHEIGSILDLPKPCV-LSGANVAKDVAAENFAEAT 120 L + RAISLIKGI + P L+ I LD+ C+ LSG+N+A++++ E+F+E+T Sbjct 144 NLKKNARAISLIKGIKMVRSKPQLLSDIIEKKLDIE--CLALSGSNIAEELSREHFSEST 201 Query 121 IGHADGETETAALWQLLFDRPNFKINVLPDVDGVEVCGALKNVVALAGGFCEGMGQGTNT 180 IG E +WQ LFDR FK+N + D GVE+CGALKNV+AL GF +G+ NT Sbjct 202 IGFEKKGNE--VIWQNLFDRTYFKVNCIQDKPGVEICGALKNVIALGVGFIDGLTASYNT 259 Query 181 KAAILRLGVEEIKTFTMLFFGDLLADTLYDSAGYADVITTVFGGRNARVAAAFVRQKGKD 240 K+AI+R+G+EE+K F +FF ++L +T DS G AD+ITT GGRN + A F ++KG+D Sbjct 260 KSAIIRIGLEEMKKFAKMFFPNVLDETFLDSCGLADLITTCLGGRNFKCAKEFAKRKGRD 319 Query 241 -WDQLEKEMLNGQKLQGPATLELVAEVIRVNEVEHLFPLFTATYAVAFQNADPQAILDVF 299 W+ +E E+LNGQKLQG T + V +V+ ++++ FPL Y ++FQ +P +I+DV Sbjct 320 SWELIEAELLNGQKLQGIDTTKEVYDVLEYHQLKTEFPLICTIYEISFQKKNPCSIIDVL 379 Query 300 RTERPRSIQ 308 T++ R+I+ Sbjct 380 STKKLRNIK 388 Lambda K H 0.321 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 133899978825 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40