bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0074_orf4
Length=354
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0157 270 6e-71
> 5833.PF11_0157
Length=390
Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 205/309 (66%), Gaps = 6/309 (1%)
Query 2 LTDWINIHHENRKYLPGFELPSNLRAVPSLTDACRDADLLVFVMPHQFIERACRELRKAK 61
L+D IN EN KY+ G ++P N+ A+ +L + DADLL+FV+PHQ+++ E+ +
Sbjct 84 LSDIINKKKENIKYMKGMKIPENILAISNLKEVIDDADLLIFVLPHQYLDNVLDEIVQNN 143
Query 62 LLPPHCRAISLIKGIGVRNGWPITLTHEIGSILDLPKPCV-LSGANVAKDVAAENFAEAT 120
L + RAISLIKGI + P L+ I LD+ C+ LSG+N+A++++ E+F+E+T
Sbjct 144 NLKKNARAISLIKGIKMVRSKPQLLSDIIEKKLDIE--CLALSGSNIAEELSREHFSEST 201
Query 121 IGHADGETETAALWQLLFDRPNFKINVLPDVDGVEVCGALKNVVALAGGFCEGMGQGTNT 180
IG E +WQ LFDR FK+N + D GVE+CGALKNV+AL GF +G+ NT
Sbjct 202 IGFEKKGNE--VIWQNLFDRTYFKVNCIQDKPGVEICGALKNVIALGVGFIDGLTASYNT 259
Query 181 KAAILRLGVEEIKTFTMLFFGDLLADTLYDSAGYADVITTVFGGRNARVAAAFVRQKGKD 240
K+AI+R+G+EE+K F +FF ++L +T DS G AD+ITT GGRN + A F ++KG+D
Sbjct 260 KSAIIRIGLEEMKKFAKMFFPNVLDETFLDSCGLADLITTCLGGRNFKCAKEFAKRKGRD 319
Query 241 -WDQLEKEMLNGQKLQGPATLELVAEVIRVNEVEHLFPLFTATYAVAFQNADPQAILDVF 299
W+ +E E+LNGQKLQG T + V +V+ ++++ FPL Y ++FQ +P +I+DV
Sbjct 320 SWELIEAELLNGQKLQGIDTTKEVYDVLEYHQLKTEFPLICTIYEISFQKKNPCSIIDVL 379
Query 300 RTERPRSIQ 308
T++ R+I+
Sbjct 380 STKKLRNIK 388
Lambda K H
0.321 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 133899978825
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40