bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0061_orf2
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G60100.1 125 5e-28
> 3702.AT3G60100.1
Length=464
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query 34 AALPALLQVLPADGHPMAAFAAAAAALSDYSFFRVATEEGVISKKDIWRPALVDALALVA 93
AA+PA+ LP+ HPM FA+ AL S F+ A E+G ISK W P DAL L+A
Sbjct 149 AAVPAI-DALPSTAHPMTQFASGVMALQVQSEFQKAYEQGDISKSKYWEPTFEDALNLIA 207
Query 94 RAAVAAAHIYRNKFGEGEMPAPDPDLDFATNFSRLLGFKGQQQEELLRLYLLLHADHEGG 153
R V A+++YR + +G + D LD+ NFS +LGF Q +EL+RLY+ +H+DHEGG
Sbjct 208 RVPVVASYVYRRMYKDGSIIPLDDSLDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGG 267
Query 154 NVSAHA 159
NVSAHA
Sbjct 268 NVSAHA 273
Lambda K H
0.320 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26871144147
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40