bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0061_orf2 Length=160 Score E Sequences producing significant alignments: (Bits) Value 3702.AT3G60100.1 125 5e-28 > 3702.AT3G60100.1 Length=464 Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Query 34 AALPALLQVLPADGHPMAAFAAAAAALSDYSFFRVATEEGVISKKDIWRPALVDALALVA 93 AA+PA+ LP+ HPM FA+ AL S F+ A E+G ISK W P DAL L+A Sbjct 149 AAVPAI-DALPSTAHPMTQFASGVMALQVQSEFQKAYEQGDISKSKYWEPTFEDALNLIA 207 Query 94 RAAVAAAHIYRNKFGEGEMPAPDPDLDFATNFSRLLGFKGQQQEELLRLYLLLHADHEGG 153 R V A+++YR + +G + D LD+ NFS +LGF Q +EL+RLY+ +H+DHEGG Sbjct 208 RVPVVASYVYRRMYKDGSIIPLDDSLDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGG 267 Query 154 NVSAHA 159 NVSAHA Sbjct 268 NVSAHA 273 Lambda K H 0.320 0.133 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26871144147 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40