bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0041_orf1
Length=483
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0495 62.0 5e-08
> 5833.PF14_0495
Length=2189
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 45/256 (17%)
Query 250 LLESLDPSILSSLLTSFDWIVHTQATLQVNQSASMY--HDLEAPSQQYKTTGEKKEGYRL 307
LL+ + +L ++ +S + HT AT+Q+ Q+A H+ QY + G
Sbjct 1548 LLQHIPAHMLENITSSIRFTTHTIATMQIIQNAKYMSKHNF----SQYDSKGMLARQI-F 1602
Query 308 SSGGLVKTTDKQLEDWAEYG-------------IPASLSRKLRRGEKLPKSVAFEKIATP 354
+ GG + D + W G + S+ +L+ E+ ++ + E+ A
Sbjct 1603 TKGGFAEYADNLMAKWFSKGFEEYKREQIENFKMENSIDSELKDSEREDENDSSEESAKK 1662
Query 355 DLT----------------------KWEQQLNNKWLDALSAYLEHPYGRAALAARDPVAL 392
L KW+Q +N + + AL +LE + A V
Sbjct 1663 KLQDLQLEEREKMKKENSLLFNQSDKWDQFINKELVRALGLWLE--FNDNPTNASSFVYK 1720
Query 393 LVKESKDRLEAEVDSTIFLGRVVKVPRMSKFKKAMKAISNFFRAILRAPE-QSEYAVWMG 451
+V++SK LE +D+ I R VK + + F++ I + +LR P + E+A+W G
Sbjct 1721 VVEDSKHLLENNIDNNIIFSRTVKPTKQTAFRRFFNKILSLGNMLLRKPSFRVEHALWFG 1780
Query 452 VKVNVDKVLAVMKAVN 467
+++ K +++ V+
Sbjct 1781 ATIDIKKAFILLEKVS 1796
Lambda K H
0.319 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 206269077339
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40