bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0029_orf1 Length=174 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1030w 241 8e-63 > 5833.PFL1030w Length=524 Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 122/163 (74%), Positives = 148/163 (90%), Gaps = 0/163 (0%) Query 6 RRRIPEKFVARPIIEEREIYIAKKEVQERTIEVPHVHYEHKFAEVAKSLKIKKIVPTITE 65 ++ IPEKFVA+PIIEEREIY++KKE ++R IE+PHV YEH F +V K LK+ K+VP +T+ Sbjct 112 KKNIPEKFVAKPIIEEREIYVSKKERKQREIEIPHVKYEHTFEKVKKQLKVNKLVPNVTQ 171 Query 66 VVKEVPREVYKPVIEEKVIEVPQGVKYVEVPVEVPCLYPPKIVPRPKVQVVERVVETVKP 125 V+KEVP+E+ KPVIEEK+IEVPQGVKYVEVPVEVPCLYPPKI+P+ Q VER+VET+KP Sbjct 172 VIKEVPKEILKPVIEEKIIEVPQGVKYVEVPVEVPCLYPPKIMPKVVTQYVERIVETIKP 231 Query 126 VVQEKVIEVPQTVVKQIPKIKTVEVPYYVPRYVEKIIEVPYQP 168 VVQEK+IEVPQTV+KQ+PKIKTVEVPYYVPRYVEKIIEVP++P Sbjct 232 VVQEKIIEVPQTVIKQVPKIKTVEVPYYVPRYVEKIIEVPFKP 274 Lambda K H 0.317 0.138 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34096907735 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40