bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0012_orf1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0143 93.6 1e-18
> 5833.PF14_0143
Length=2770
Score = 93.6 bits (231), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query 23 VSVLELIRTKPHVMDPLIYDSHRIVHQLIPPSNCRCTARALARFYAALGEGQIISKPLLD 82
+S+ +L+++KP+++DPLIYDS +I+ + IP N R TA+AL + +A + +++
Sbjct 2567 ISLFQLMQSKPYILDPLIYDSKKILDKFIP-INGRFTAKALCKLFAFVNNEFFFPSYIIN 2625
Query 83 AARVAHTVDPTLEALLLTGGGSRTWGLGYQLYDCVY 118
R +T+D ++EAL+LTG SRTWG+G+QL++C Y
Sbjct 2626 KIRKKYTIDKSVEALILTGAMSRTWGMGFQLFECEY 2661
Lambda K H
0.319 0.138 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22914837435
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40