bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0011_orf2 Length=266 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0309 110 6e-23 > 5833.PF10_0309 Length=917 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%) Query 112 CTCVGGD-IEAPEPAETLEQCSEGDSSLLAPRVVENLKNNLKCRWLLPIQKYAIAVAAKG 170 C G + I PEP +EQ S+ L + +N+ C + IQKY+I V K Sbjct 509 CKLYGDEKINIPEPLINMEQLSK----LCDEELYKNICLKGYCN-MTTIQKYSIPVILKK 563 Query 171 LDLVACAATGTGKTLAFLSPLVSKCLLHQQLFRPHFAGSHAQASPLAVVLCPTRELAIQI 230 ++L+AC+ TG+GKT +FL P++S ++ RPHF GS+A SPL ++LCPTREL IQI Sbjct 564 INLLACSQTGSGKTFSFLCPIISNLKKENEILRPHFPGSYACISPLCLILCPTRELVIQI 623 Query 231 NEQLARLVVGTTLSHSIWIGGVSATEQVREINQKQ 265 ++ L ++ + GG + +QV +IN+KQ Sbjct 624 QNEVNSLTKNMSIVCMSFYGGETMKDQVAQINEKQ 658 Lambda K H 0.314 0.128 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 84358518300 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40