bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0008_orf1
Length=284
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0520w 152 8e-36
> 5833.PFF0520w
Length=509
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Query 37 KEIEIWLSLDHPYIARLLEVFEDDRAVYLVSEYCPGGSLYDFLSAMQKCPEEVAKTWTLQ 96
+EIEI LDHP I +L E +E+D +YL+ E C G L+D + E+ A T Q
Sbjct 116 QEIEIMKKLDHPNIVKLYETYENDNYIYLIMELCSGRELFDSIIENGSFTEKNAATIMKQ 175
Query 97 MVRAIGFLQGCGVVHRNLRLESWQLTNQGCFPPLKLYGLSHSTRWHKKEGRLNAACGLLG 156
+ AI +L +VHR+L+ E++ ++ LK+ S E A G
Sbjct 176 IFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNLGTGEFTTTKA-GTPY 234
Query 157 YTSPDVLLGRYTDACDMWSLGVIVYQLLCGRPPFVG-TQREKIRQILSGDINMLYLEKAG 215
Y +P VL G+Y CD+WS GVI+Y LLCG PPF G T E ++++ G+ +
Sbjct 235 YVAPQVLDGKYDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKKGEFCFYENDWGS 294
Query 216 VSDEAKSFVTQLLTISPHNRLTPQQALEHPWLFGQMLAHQ--PFPPACITGLCWFRYSST 273
+S +AK+ +T+LLT +P+ R T ++AL HPW+ +H+ + L F+ +
Sbjct 295 ISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTLLKNLKNFKKENE 354
Query 274 LRRAAVLMCA 283
L++ A+ + A
Sbjct 355 LKKIALTIIA 364
Lambda K H
0.324 0.139 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 94212178333
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40