DGPI Result
ProteinEten_5044_orf6
Sequence
GKQDCVAEKAVWLAGKCAEARKNWKSCVAAWQQAFAAVYVRSSRARGVRTAGGSPRAPDSPQ
Length62
Data from DGPIN-term Signal :
  there is a N-term signal (1..35 in violet)
  maximal score=4.66

C-term Hydrophobicity profile :
  hydrophobe length (low-pass filter)=0
  hydrophile length (low-pass filter)=21
  hydrophobe length (median filter)=0
  hydrophile length (median filter)=21
  average hydrophobe length = 0.0 (in blue)
  average hydrophile length = 21.0

Cleavage site (w) :
  There's a GPI-anchor near 43 (7 aa after hydrophobic tail)
  There's a potential cleavage site at 43 (score=0.25800002) detected by w,w+2 rule.
  There's a potential cleavage site at 42 (score=0.24939999) detected by w,w+2 rule.
  The best cleavage site is 43

Conclusion :
  This protein is not GPI-anchored (C-terminal hydrophobic area is too short).
  There is a potential cleavage site at 43 (w, w+1, w+2 in red)

Sequence annotated by DGPI
GKQDCVAEKAVWLAGKCAEARKNWKSCVAAWQQAFAAVYVRSSRARGVRTAGGSPRAPDSPQ





Generated by DGPI v.2.04 (free version for educational purpose only)
Mon Dec 22 13:26:56 BRST 2008