DGPI Result
ProteinEten_4181_orf1
Sequence
RHQVCWEKSVFVFFWKSAFFAGPAVAPSSSAAQQQQQQQRSSAAAARGAFRLRSALLPPVFPESRVSTQNGKRHPLPVAGEARDVRAARGARARAAGALP
REGAVDAAGARRLSGLLPNSALRHPRRPRRRPLLLDARHPRVEPRDFDGTWHLADRHQRHGHAAARGLADHPGGPEPPRGPRALPGRPEALGAADHHGGR
RLRHQRHVRPGL
Length212
Data from DGPIN-term Signal :
  there is a N-term signal (1..30 in violet)
  maximal score=3.38

C-term Hydrophobicity profile :
  hydrophobe length (low-pass filter)=0
  hydrophile length (low-pass filter)=40
  hydrophobe length (median filter)=0
  hydrophile length (median filter)=40
  average hydrophobe length = 0.0 (in blue)
  average hydrophile length = 40.0

Cleavage site (w) :
  There's a GPI-anchor near 192 (7 aa after hydrophobic tail)
  There's a potential cleavage site at 192 (score=0.64800006) detected by w,w+2 rule.
  The best cleavage site is 192

Conclusion :
  This protein is not GPI-anchored (C-terminal hydrophobic area is too short).
  There is a potential cleavage site at 192 (w, w+1, w+2 in red)

Sequence annotated by DGPI
RHQVCWEKSVFVFFWKSAFFAGPAVAPSSSAAQQQQQQQRSSAAAARGAFRLRSALLPPVFPESRVSTQNGKRHPLPVAGEARDVRAARGARARAAGALP
REGAVDAAGARRLSGLLPNSALRHPRRPRRRPLLLDARHPRVEPRDFDGTWHLADRHQRHGHAAARGLADHPGGPEPPRGPRALPGRPEALGAADHHGGR
RLRHQRHVRPGL





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Mon Dec 22 18:15:27 BRST 2008