DGPI Result
ProteinEten_3629_orf2
Sequence
DSPFSRTHPGVAKMSGLCARRLFRNGGCALLAAFLIVQHPDGGESVFNDLTGASVELPVQPTPPQPPLQGGASSFPQQLLGKHAFVPQAEGTTTTAGPSL
PTQQPATAGYASAFTQFFGSATPAPAVPPTQPQAPAVPAGLPGFLPPLSLDFYGSPTASAVGAVATAGNAAGSAGGAAGLAGGNWSPFGSRAQNALAAGL
PVHTAEVGDVTGAAPVTDTSVPVGFLSSANGVYKVPRFPSGVQSVSEPNEDAIKKCILRISASQMTSGFSDTLKSGGVQITGSAFSQLLRLVGTSSPRYT
SKLSAPIVLFQRAVGTRISYEIRVAVPQGCVLLPSDPNLMGLIRREGKYIVEAAVRLQPDMLAEYSSSVAAVPADVVAFAAALAPNSNFQPLGHCVYVAH
FTTKPENIQLFASYTQVKVVGVTAMGMETLQLQIPLACLPQSLHRTALWSVGLHSGTAVIVAFSPPPKAEPEWFVVRTTGDEAAFSRLTGSRP
Length493
Data from DGPIN-term Signal :
  there ISN'T a N-term signal
  maximal score=1.85

C-term Hydrophobicity profile :
  hydrophobe length (low-pass filter)=0
  hydrophile length (low-pass filter)=12
  hydrophobe length (median filter)=7
  hydrophile length (median filter)=27
  average hydrophobe length = 3.5 (in blue)
  average hydrophile length = 19.5

Cleavage site (w) :
  There's a GPI-anchor near 455 (7 aa after hydrophobic tail)
  There's a potential cleavage site at 455 (score=0.344) detected by w,w+2 rule.
  The best cleavage site is 455

Conclusion :
  This protein is not GPI-anchored (no signal).
  There is a potential cleavage site at 455 (w, w+1, w+2 in red)

Sequence annotated by DGPI
DSPFSRTHPGVAKMSGLCARRLFRNGGCALLAAFLIVQHPDGGESVFNDLTGASVELPVQPTPPQPPLQGGASSFPQQLLGKHAFVPQAEGTTTTAGPSL
PTQQPATAGYASAFTQFFGSATPAPAVPPTQPQAPAVPAGLPGFLPPLSLDFYGSPTASAVGAVATAGNAAGSAGGAAGLAGGNWSPFGSRAQNALAAGL
PVHTAEVGDVTGAAPVTDTSVPVGFLSSANGVYKVPRFPSGVQSVSEPNEDAIKKCILRISASQMTSGFSDTLKSGGVQITGSAFSQLLRLVGTSSPRYT
SKLSAPIVLFQRAVGTRISYEIRVAVPQGCVLLPSDPNLMGLIRREGKYIVEAAVRLQPDMLAEYSSSVAAVPADVVAFAAALAPNSNFQPLGHCVYVAH
FTTKPENIQLFASYTQVKVVGVTAMGMETLQLQIPLACLPQSLHRTALWSVGLHSGTAVIVAFSPPPKAEPEWFVVRTTGDEAAFSRLTGSRP





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Mon Dec 22 17:56:56 BRST 2008