DGPI Result
ProteinEten_3306_orf2
Sequence
VLQQQLLLQLVLRRASQLPIRLFLLRGFPLMQNSPAAVPPRAPPQAGPLAPAACCQPAPPDAVHLVKQVSKKRLIIFSFLLFISAASQSLNGLLISAPIS
KS
Length102
Data from DGPIN-term Signal :
  there is a N-term signal (1..16 in violet)
  maximal score=5.21

C-term Hydrophobicity profile :
  hydrophobe length (low-pass filter)=35
  hydrophile length (low-pass filter)=3
  hydrophobe length (median filter)=7
  hydrophile length (median filter)=3
  average hydrophobe length = 21.0 (in blue)
  average hydrophile length = 3.0

Cleavage site (w) :
  There's a GPI-anchor near 84 (7 aa after hydrophobic tail)
  There's a potential cleavage site at 84 (score=2.3220003) detected by w,w+2 rule.
  The best cleavage site is 84

Conclusion :
  This protein is GPI-anchored (signal, hydrophobic & hydrophilic tail present).
  There is a potential cleavage site at 84 (w, w+1, w+2 in red)

Sequence annotated by DGPI
VLQQQLLLQLVLRRASQLPIRLFLLRGFPLMQNSPAAVPPRAPPQAGPLAPAACCQPAPPDAVHLVKQVSKKRLIIFSFLLFISAASQSLNGLLISAPIS
KS





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Mon Dec 22 17:40:47 BRST 2008