BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_8463_orf2
(60 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|258597353|ref|XP_001348026.2| conserved Plasmodium protein [P... 46 0.002
gi|70950268|ref|XP_744472.1| hypothetical protein [Plasmodium ch... 46 0.002
gi|221056426|ref|XP_002259351.1| hypothetical protein, conserved... 45 0.003
gi|156098885|ref|XP_001615458.1| hypothetical protein [Plasmodiu... 45 0.003
gi|325119480|emb|CBZ55033.1| conserved hypothetical protein [Neo... 43 0.012
gi|237829997|ref|XP_002364296.1| hypothetical protein, conserved... 43 0.013
gi|221487366|gb|EEE25598.1| conserved hypothetical protein [Toxo... 43 0.014
>gi|258597353|ref|XP_001348026.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254832679|gb|AAN35939.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 174
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 32 QKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
KT+GMQR+KKGEH S+GMKKGV R KT
Sbjct: 146 NKTYGMQRVKKGEHNSWGMKKGVFRSRKT 174
>gi|70950268|ref|XP_744472.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524439|emb|CAH77044.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 170
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 32 QKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
KT+GMQR+KKGEH S+GMKKGV R KT
Sbjct: 142 NKTYGMQRVKKGEHNSWGMKKGVFRSRKT 170
>gi|221056426|ref|XP_002259351.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809422|emb|CAQ40124.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 174
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 32 QKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
KT+GMQR+KKGEH S+GMKKGV R KT
Sbjct: 146 NKTYGMQRVKKGEHNSWGMKKGVFRSRKT 174
>gi|156098885|ref|XP_001615458.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148804332|gb|EDL45731.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 147
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 32 QKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
KT+GMQR+KKGEH S+GMKKGV R KT
Sbjct: 119 NKTYGMQRVKKGEHNSWGMKKGVFRSRKT 147
>gi|325119480|emb|CBZ55033.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 198
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 3 FKTLIQRFRETATPSNVESLYRMRRLLLPQKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
K ++ F+E P+ V + Y +RR LL MQR+K GEH YG ++G RE KT
Sbjct: 141 IKEELKAFKERIKPNPVHAQYDLRRRLLVYPRQAMQRLKTGEHGGYGTRRGTIRERKT 198
>gi|237829997|ref|XP_002364296.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211961960|gb|EEA97155.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221507164|gb|EEE32768.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 198
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 3 FKTLIQRFRETATPSNVESLYRMRRLLLPQKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
K ++ F+E P+ V + Y +RR LL MQR+K GEH YG ++G RE KT
Sbjct: 141 IKEELKAFKERIQPNPVHAQYDLRRKLLVYPRQAMQRLKTGEHGGYGTRRGTIRERKT 198
>gi|221487366|gb|EEE25598.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 198
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 7 IQRFRETATPSNVESLYRMRRLLLPQKTFGMQRMKKGEHQSYGMKKGVPRECKT 60
++ F+E P+ V + Y +RR LL MQR+K GEH YG ++G RE KT
Sbjct: 145 LKAFKERIQPNPVHAQYDLRRKLLVYPRQAMQRLKTGEHGGYGTRRGTIRERKT 198
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.323 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 539,944,045
Number of extensions: 13921848
Number of successful extensions: 34166
Number of sequences better than 10.0: 7
Number of HSP's gapped: 34213
Number of HSP's successfully gapped: 7
Length of query: 60
Length of database: 5,058,227,080
Length adjustment: 33
Effective length of query: 27
Effective length of database: 4,570,561,924
Effective search space: 123405171948
Effective search space used: 123405171948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.9 bits)