BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_7773_orf1
         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|37699770|emb|CAE52295.1| surface antigen 12 [Eimeria tenella]      184     5e-45
gi|37699780|emb|CAE52300.1| surface antigen 9 [Eimeria tenella]       134     4e-30
gi|37699806|emb|CAE52313.1| surface antigen 10 [Eimeria tenella]      129     2e-28
gi|149980826|gb|ABR53732.1| surface antigen 10 [Eimeria tenella]      129     2e-28
gi|166034393|gb|ABY78897.1| surface antigen 10 [Eimeria tenella]      127     5e-28
gi|37699768|emb|CAE52294.1| surface antigen 7 [Eimeria tenella]       120     6e-26
gi|37699774|emb|CAE52297.1| surface antigen 6 [Eimeria tenella]       117     6e-25
gi|37699766|emb|CAE52293.1| surface antigen 5 [Eimeria tenella]       117     7e-25
gi|151303303|gb|ABR92920.1| surface antigen 7 [Eimeria tenella]       117     7e-25
gi|37699776|emb|CAE52298.1| surface antigen 8 [Eimeria tenella]       115     2e-24
gi|149389603|gb|ABR26258.1| merozoite surface antigen 5 [Eimeria...   115     2e-24
gi|37699778|emb|CAE52299.1| surface antigen 11 [Eimeria tenella]      114     4e-24
gi|37699772|emb|CAE52296.1| surface antigen 4 [Eimeria tenella]        48     5e-04
gi|37699808|emb|CAE52314.1| surface antigen 3 [Eimeria tenella]        47     0.001
gi|2507143|sp|P13399.2|TA4_EIMTE RecName: Full=Sporulated oocyst...    45     0.003
gi|84783094|gb|ABC61818.1| TA4 antigen protein [Eimeria tenella]       45     0.003
gi|158877|gb|AAA29075.1| TA4 antigen protein [Eimeria tenella]         45     0.003
gi|169793986|gb|ACA81533.1| NA4 antigen [Eimeria necatrix]             44     0.010
gi|37699782|emb|CAE52301.1| surface antigen 2 [Eimeria tenella]        42     0.038
gi|151303301|gb|ABR92919.1| surface antigen 2 [Eimeria tenella]        42     0.038
gi|336268487|ref|XP_003349008.1| hypothetical protein SMAC_09044...    38     0.47 
gi|116278579|gb|ABJ94605.1| pol protein [Human immunodeficiency ...    35     3.3  
gi|224111132|ref|XP_002315759.1| predicted protein [Populus tric...    35     3.6  

>gi|37699770|emb|CAE52295.1| surface antigen 12 [Eimeria tenella]
          Length = 260

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 23  MQVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELY 82
           MQVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELY
Sbjct: 93  MQVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELY 152

Query: 83  NSQDNVSFVALYNPSANASADCRVVT 108
           NSQDNVSFVALYNPSANASADCRVVT
Sbjct: 153 NSQDNVSFVALYNPSANASADCRVVT 178


>gi|37699780|emb|CAE52300.1| surface antigen 9 [Eimeria tenella]
          Length = 259

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 70/85 (82%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           + ET A    TNPF  GTYAFK LT EQ +CKETV YWKAA+KNFTGLPPS+ +AG LYN
Sbjct: 93  KTETAAQSKSTNPFEAGTYAFKSLTAEQPNCKETVAYWKAAYKNFTGLPPSRKEAGTLYN 152

Query: 84  SQDNVSFVALYNPSANASADCRVVT 108
            QDNVSFVA+YNPS+NA+ADCRVVT
Sbjct: 153 KQDNVSFVAVYNPSSNATADCRVVT 177


>gi|37699806|emb|CAE52313.1| surface antigen 10 [Eimeria tenella]
          Length = 261

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 69/84 (82%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q ET A  +  NPF  GTYAFK LT EQ +CKET+DYWKAA++NFTGLPPSK + G LY+
Sbjct: 93  QTETAAKTSSANPFEKGTYAFKSLTAEQPNCKETIDYWKAAYENFTGLPPSKKEGGTLYD 152

Query: 84  SQDNVSFVALYNPSANASADCRVV 107
            QDNVSFVA+YNPS++A+ADCRVV
Sbjct: 153 DQDNVSFVAVYNPSSSATADCRVV 176


>gi|149980826|gb|ABR53732.1| surface antigen 10 [Eimeria tenella]
          Length = 261

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 69/84 (82%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q ET A  +  NPF  GTYAFK LT EQ +CKETVDYWKAA+KNFTGLPPS+ + G LY+
Sbjct: 93  QAETAAKTSSANPFEKGTYAFKSLTAEQPNCKETVDYWKAAYKNFTGLPPSRKEDGTLYD 152

Query: 84  SQDNVSFVALYNPSANASADCRVV 107
            QDNVSFVA+YNPS++A+ADCRVV
Sbjct: 153 DQDNVSFVAVYNPSSSATADCRVV 176


>gi|166034393|gb|ABY78897.1| surface antigen 10 [Eimeria tenella]
          Length = 261

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 68/84 (80%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q ET A  +  NPF  GTYAFK LT EQ +CKETVDYWKAA+KNFTGLPPS+ + G LY+
Sbjct: 93  QTETAAKTSSANPFEKGTYAFKSLTAEQPNCKETVDYWKAAYKNFTGLPPSRKEDGTLYD 152

Query: 84  SQDNVSFVALYNPSANASADCRVV 107
            QDN SFVA+YNPS++A+ADCRVV
Sbjct: 153 DQDNASFVAVYNPSSSATADCRVV 176


>gi|37699768|emb|CAE52294.1| surface antigen 7 [Eimeria tenella]
          Length = 253

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 68/85 (80%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q + +A    TNPF  GTYAFK LT  + +CKETVD+WKAAF+NFTGLPPSK +   LY 
Sbjct: 91  QKDPVAAAGATNPFQDGTYAFKSLTAAEPNCKETVDHWKAAFENFTGLPPSKTEGANLYK 150

Query: 84  SQDNVSFVALYNPSANASADCRVVT 108
           +QDNVSFVALYNPS++A+ADC+VVT
Sbjct: 151 NQDNVSFVALYNPSSDATADCKVVT 175


>gi|37699774|emb|CAE52297.1| surface antigen 6 [Eimeria tenella]
          Length = 256

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 68/85 (80%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q E +   + TNPF  GTYAFK LT  + +CKE V+YWKAAFKNFTGLPPS++ AG+LY 
Sbjct: 93  QKEPVEATSGTNPFEKGTYAFKSLTTAEPNCKEIVNYWKAAFKNFTGLPPSESQAGDLYK 152

Query: 84  SQDNVSFVALYNPSANASADCRVVT 108
           S +NVSFVALYN S+NA+ADC+VVT
Sbjct: 153 SYNNVSFVALYNTSSNATADCQVVT 177


>gi|37699766|emb|CAE52293.1| surface antigen 5 [Eimeria tenella]
          Length = 257

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/84 (65%), Positives = 66/84 (78%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q E     +   PF  G YAFK LT  + +CKE VDYWK+AFKNF+GLPPSK+ AG+LYN
Sbjct: 94  QTEPAKAASAAKPFEQGIYAFKSLTTAEPNCKEAVDYWKSAFKNFSGLPPSKSQAGQLYN 153

Query: 84  SQDNVSFVALYNPSANASADCRVV 107
           SQDNVSFVALYNPS++A+ADCRV+
Sbjct: 154 SQDNVSFVALYNPSSDATADCRVI 177


>gi|151303303|gb|ABR92920.1| surface antigen 7 [Eimeria tenella]
          Length = 253

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 67/85 (78%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q + +A    TNPF  GTYAFK LT  + +CKETVD+WKAAF+NFTGL PSK +   LY 
Sbjct: 91  QKDPVAAAGATNPFQDGTYAFKSLTAAEPNCKETVDHWKAAFENFTGLRPSKTEGANLYK 150

Query: 84  SQDNVSFVALYNPSANASADCRVVT 108
           +QDNVSFVALYNPS++A+ADC+VVT
Sbjct: 151 NQDNVSFVALYNPSSDATADCKVVT 175


>gi|37699776|emb|CAE52298.1| surface antigen 8 [Eimeria tenella]
          Length = 265

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 64/82 (78%)

Query: 26  ETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYNSQ 85
           +T+A  +   PF  GTYAFK LT  +  CKETVDYWKAA+KNFTGLPP K D   LY +Q
Sbjct: 97  KTMAASSSLKPFKDGTYAFKSLTAAKPDCKETVDYWKAAYKNFTGLPPPKTDNETLYKNQ 156

Query: 86  DNVSFVALYNPSANASADCRVV 107
           DNVSFV+LYNPS++A+ADCRVV
Sbjct: 157 DNVSFVSLYNPSSSATADCRVV 178


>gi|149389603|gb|ABR26258.1| merozoite surface antigen 5 [Eimeria tenella]
          Length = 257

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/84 (64%), Positives = 66/84 (78%)

Query: 24  QVETLADQAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYN 83
           Q E     +   PF  G YAFK LT  + +CKE VDYWK+AFKNF+GLPPSK+ AG+LYN
Sbjct: 94  QTEPAKAASAAKPFEQGIYAFKSLTTAEPNCKEAVDYWKSAFKNFSGLPPSKSQAGQLYN 153

Query: 84  SQDNVSFVALYNPSANASADCRVV 107
           SQ+NVSFVALYNPS++A+ADCRV+
Sbjct: 154 SQENVSFVALYNPSSDATADCRVI 177


>gi|37699778|emb|CAE52299.1| surface antigen 11 [Eimeria tenella]
          Length = 263

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/78 (66%), Positives = 61/78 (78%)

Query: 31  QAPTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPSKNDAGELYNSQDNVSF 90
           QA   PF  GTYAFK LT EQ  C++TVDYWKAA+KNFTG+PP K++   +Y+ QDNVSF
Sbjct: 98  QATAEPFKDGTYAFKSLTAEQPDCEKTVDYWKAAYKNFTGMPPPKSEDTSIYSKQDNVSF 157

Query: 91  VALYNPSANASADCRVVT 108
           VALYNP   A+ADCRVVT
Sbjct: 158 VALYNPIPKATADCRVVT 175


>gi|37699772|emb|CAE52296.1| surface antigen 4 [Eimeria tenella]
          Length = 253

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPSKNDAGE--LYNSQDNVSFVALYNP 96
           GT+A+  + D +  C   V+YWK  F  F   +PP   +A +  +YN +  VSFVALYNP
Sbjct: 101 GTFAYYPVADGKKDCNAAVEYWKGGFSLFKNEIPPEFTEANKTTVYNDRA-VSFVALYNP 159

Query: 97  SANASADC 104
             +    C
Sbjct: 160 KPDPVVSC 167


>gi|37699808|emb|CAE52314.1| surface antigen 3 [Eimeria tenella]
          Length = 255

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPSKNDAGE--LYNSQDNVSFVALYNP 96
           GT+A+ +    ++ CK  V YWK  F  F   LPP+ N   +  +Y  Q   SFVALYNP
Sbjct: 98  GTFAYYR---GENDCKAAVQYWKDGFPLFKNELPPTYNALNDPKIYTDQAT-SFVALYNP 153

Query: 97  SANASADCRVVT 108
            A+  A C  VT
Sbjct: 154 QASPVASCAFVT 165


>gi|2507143|sp|P13399.2|TA4_EIMTE RecName: Full=Sporulated oocyst TA4 antigen; AltName: Full=Major
           sporozoite surface antigen; Contains: RecName:
           Full=Sporulated oocyst TA4 antigen 17 kDa subunit;
           Contains: RecName: Full=Sporulated oocyst TA4 antigen 8
           kDa subunit; Flags: Precursor
 gi|158873|gb|AAA29074.1| sporozoite surface antigen precursor [Eimeria tenella]
 gi|38602661|emb|CAE52292.2| surface antigen 1 [Eimeria tenella]
          Length = 253

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPSKNDAGE--LYNSQDNVSFVALYNP 96
           G +A+  +TD +  C + V+YWK     F   +PP+     +  +YN +  VSFVALYNP
Sbjct: 103 GNFAYYPVTDGKKECSDAVEYWKGGLSQFNDTIPPTFQALNDPVVYNDR-AVSFVALYNP 161

Query: 97  SANASADC 104
             +    C
Sbjct: 162 KTSPVVSC 169


>gi|84783094|gb|ABC61818.1| TA4 antigen protein [Eimeria tenella]
          Length = 229

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPSKNDAGE--LYNSQDNVSFVALYNP 96
           G +A+  +TD +  C + V+YWK     F   +PP+     +  +YN +  VSFVALYNP
Sbjct: 79  GNFAYYPVTDGKKECSDAVEYWKGGLSQFNDTIPPTFQALNDPVVYNDR-AVSFVALYNP 137

Query: 97  SANASADC 104
             +    C
Sbjct: 138 KTSPVVSC 145


>gi|158877|gb|AAA29075.1| TA4 antigen protein [Eimeria tenella]
          Length = 231

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPSKNDAGE--LYNSQDNVSFVALYNP 96
           G +A+  +TD +  C + V+YWK     F   +PP+     +  +YN +  VSFVALYNP
Sbjct: 81  GNFAYYPVTDGKKECSDAVEYWKGGLSQFNDTIPPTFQALNDPVVYNDR-AVSFVALYNP 139

Query: 97  SANASADC 104
             +    C
Sbjct: 140 KTSPVVSC 147


>gi|169793986|gb|ACA81533.1| NA4 antigen [Eimeria necatrix]
          Length = 248

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFT-GLPPS----KNDAGELYNSQDNVSFVALY 94
           G +A+  +TD +  C + ++YWK     F   +PP+     N A  +YN +  VSFVALY
Sbjct: 103 GNFAYYPVTDGKRECSDALEYWKGGLSQFNDKIPPTFQALNNPA--VYNDR-AVSFVALY 159

Query: 95  NPSANASADC 104
           NP  +    C
Sbjct: 160 NPKPSPVVSC 169


>gi|37699782|emb|CAE52301.1| surface antigen 2 [Eimeria tenella]
          Length = 270

 Score = 41.6 bits (96), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 7/72 (9%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPS--KNDAGELYNSQDNVSFVALYNP 96
           GT+A+     +   CK  V YWK  F  F   LPP+   ++   +Y  +  VSFVALYNP
Sbjct: 98  GTFAYY---PDGKDCKAAVQYWKEGFSLFKNELPPTYTASNTPAVYTDR-AVSFVALYNP 153

Query: 97  SANASADCRVVT 108
             +  A C +VT
Sbjct: 154 QPSPLASCALVT 165


>gi|151303301|gb|ABR92919.1| surface antigen 2 [Eimeria tenella]
          Length = 270

 Score = 41.6 bits (96), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 7/72 (9%)

Query: 40  GTYAFKKLTDEQHSCKETVDYWKAAFKNFTG-LPPS--KNDAGELYNSQDNVSFVALYNP 96
           GT+A+     +   CK  V YWK  F  F   LPP+   ++   +Y  +  VSFVALYNP
Sbjct: 98  GTFAYY---PDGKDCKAAVQYWKEGFSLFKNELPPTYTASNTPAVYTDR-AVSFVALYNP 153

Query: 97  SANASADCRVVT 108
             +  A C +VT
Sbjct: 154 QPSPLASCALVT 165


>gi|336268487|ref|XP_003349008.1| hypothetical protein SMAC_09044 [Sordaria macrospora k-hell]
 gi|289618561|emb|CBI54892.1| unnamed protein product [Sordaria macrospora]
          Length = 1350

 Score = 38.1 bits (87), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 16   WLSFSSQMQVETLADQ-APTNPFSGGTYAFKKLTDEQHSCKETVDYWKAAFKNFTGLPPS 74
            W  F +   +  ++DQ +P NP+ G   A KK T+E    K+  +     F ++    P 
Sbjct: 1203 WWEFKTPPDLYYVSDQNSPFNPYKGRREAMKKETEEAARAKKVAEEHSKKFWHYFKKRPD 1262

Query: 75   KNDAGELYNSQDNVSFVALYNPSANASA 102
              DAG   NS DN   V    P    +A
Sbjct: 1263 AMDAGCRENSPDNEGHVWCLAPGGGETA 1290


>gi|116278579|gb|ABJ94605.1| pol protein [Human immunodeficiency virus 1]
          Length = 499

 Score = 35.0 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 22/116 (18%)

Query: 3   FPLTSSRALVLPGWLSFSSQMQVE-TLADQAPTNPFSGGTYAFKK--------LTDEQHS 53
           +PLT  +   L   +   ++M+ E  ++   P NP++   +A KK        +TD +  
Sbjct: 123 WPLTKEKIKAL---IEICTEMEKEGKISKIGPENPYNTPVFAIKKKNSDXWRKITDFREL 179

Query: 54  CKETVDYWKA--AFKNFTGLPPSKN----DAGELYNS----QDNVSFVALYNPSAN 99
            K T D+W+      +  GLP SK+    D G+ Y S    +D   + A   PS N
Sbjct: 180 NKRTQDFWEVQLGIPHPAGLPKSKSVTVLDVGDAYFSIPLDEDFRKYTAFTIPSTN 235


>gi|224111132|ref|XP_002315759.1| predicted protein [Populus trichocarpa]
 gi|222864799|gb|EEF01930.1| predicted protein [Populus trichocarpa]
          Length = 198

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 1   YVFPLTSSRALVLPGWLSFSSQMQVETLADQAPTNPFSGGTYAFKKLTDEQHSC-----K 55
           + FPL  SR + LP   S SS + +++L   +P  P   G  A     D+ H        
Sbjct: 85  FGFPLDESRVIALPSACSLSSPVSLDSLCSGSPALPPLRGRTASMPGPDDHHPLAPSLPP 144

Query: 56  ETVDYWKAAFKNFTGLPPSKNDAGELYNSQ 85
           E+VD   A+    + L P+ + + E +NS 
Sbjct: 145 ESVDGSPAS--PVSPLAPASHSSAEKHNSN 172


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.314    0.128    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,105,743,910
Number of extensions: 40495743
Number of successful extensions: 92069
Number of sequences better than 10.0: 24
Number of HSP's gapped: 100294
Number of HSP's successfully gapped: 24
Length of query: 108
Length of database: 5,058,227,080
Length adjustment: 76
Effective length of query: 32
Effective length of database: 3,935,119,448
Effective search space: 125923822336
Effective search space used: 125923822336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)