BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_6931_orf4
(57 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|37699770|emb|CAE52295.1| surface antigen 12 [Eimeria tenella] 71 5e-11
gi|37699780|emb|CAE52300.1| surface antigen 9 [Eimeria tenella] 59 2e-07
gi|37699776|emb|CAE52298.1| surface antigen 8 [Eimeria tenella] 55 2e-06
gi|166034393|gb|ABY78897.1| surface antigen 10 [Eimeria tenella] 55 5e-06
gi|37699806|emb|CAE52313.1| surface antigen 10 [Eimeria tenella] 55 5e-06
gi|149980826|gb|ABR53732.1| surface antigen 10 [Eimeria tenella] 54 5e-06
gi|37699778|emb|CAE52299.1| surface antigen 11 [Eimeria tenella] 52 3e-05
gi|37699766|emb|CAE52293.1| surface antigen 5 [Eimeria tenella] 45 0.004
gi|149389603|gb|ABR26258.1| merozoite surface antigen 5 [Eimeria... 45 0.004
gi|37699774|emb|CAE52297.1| surface antigen 6 [Eimeria tenella] 40 0.075
>gi|37699770|emb|CAE52295.1| surface antigen 12 [Eimeria tenella]
Length = 260
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL
Sbjct: 226 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 260
>gi|37699780|emb|CAE52300.1| surface antigen 9 [Eimeria tenella]
Length = 259
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
QEQWDKIVSSLTGS S+AAP L+ IV FGITAL
Sbjct: 225 QEQWDKIVSSLTGSGSVAAPRLIALAIVTFGITAL 259
>gi|37699776|emb|CAE52298.1| surface antigen 8 [Eimeria tenella]
Length = 265
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 32/56 (57%)
Query: 2 YRLNCCEFDGIICVRLNAFRRQEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Y L C + +A QEQWD+IVSSLTGS S A PS V IV FGIT L
Sbjct: 209 YALICKTMPAVFGSDGSALFTQEQWDRIVSSLTGSASTAVPSFVALAIVIFGITTL 264
>gi|166034393|gb|ABY78897.1| surface antigen 10 [Eimeria tenella]
Length = 261
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q QWDKI+SSLTGS SIAAPSL+ IV FGI L
Sbjct: 227 QAQWDKIMSSLTGSGSIAAPSLIALAIVTFGIMTL 261
>gi|37699806|emb|CAE52313.1| surface antigen 10 [Eimeria tenella]
Length = 261
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q QWDKI+SSLTGS SIAAPSL+ IV FGI L
Sbjct: 227 QAQWDKIMSSLTGSGSIAAPSLIALAIVTFGIMTL 261
>gi|149980826|gb|ABR53732.1| surface antigen 10 [Eimeria tenella]
Length = 261
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q QWDKI+SSLTGS SIAAPSL+ IV FGI L
Sbjct: 227 QAQWDKIMSSLTGSGSIAAPSLIALAIVTFGIMTL 261
>gi|37699778|emb|CAE52299.1| surface antigen 11 [Eimeria tenella]
Length = 263
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
+EQWDKI SLTGS SIAAPSLV I+A GIT +
Sbjct: 229 EEQWDKIKYSLTGSASIAAPSLVALAILALGITTV 263
>gi|37699766|emb|CAE52293.1| surface antigen 5 [Eimeria tenella]
Length = 257
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q+QWD+I+SSLTGS S+A P VF + F +TAL
Sbjct: 223 QDQWDRIISSLTGSASVAIPGFGVFLLAVFSLTAL 257
>gi|149389603|gb|ABR26258.1| merozoite surface antigen 5 [Eimeria tenella]
Length = 257
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q+QWD+I+SSLTGS S+A P VF + F +TAL
Sbjct: 223 QDQWDRIISSLTGSASVAIPGFGVFLLAVFSLTAL 257
>gi|37699774|emb|CAE52297.1| surface antigen 6 [Eimeria tenella]
Length = 256
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 23 QEQWDKIVSSLTGSTSIAAPSLVVFGIVAFGITAL 57
Q+QWD+I+SSLTGS S A P F IV + L
Sbjct: 222 QDQWDRIISSLTGSASAAIPGFGAFFIVVLSMAVL 256
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.329 0.140 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 496,042,102
Number of extensions: 12736097
Number of successful extensions: 41018
Number of sequences better than 10.0: 10
Number of HSP's gapped: 41107
Number of HSP's successfully gapped: 10
Length of query: 57
Length of database: 5,058,227,080
Length adjustment: 30
Effective length of query: 27
Effective length of database: 4,614,895,120
Effective search space: 124602168240
Effective search space used: 124602168240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 76 (33.9 bits)