BLASTP 2.2.24 [Aug-08-2010]
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eten_6626_orf3
(177 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
14,777,732 sequences; 5,058,227,080 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|325115322|emb|CBZ50877.1| conserved hypothetical protein [Neo... 71 7e-11
gi|221502097|gb|EEE27843.1| hypothetical protein TGVEG_086490 [T... 68 6e-10
gi|237838863|ref|XP_002368729.1| hypothetical protein TGME49_066... 57 1e-06
gi|294948148|ref|XP_002785640.1| conserved hypothetical protein ... 44 0.011
gi|294874922|ref|XP_002767154.1| hypothetical protein Pmar_PMAR0... 41 0.071
gi|209875447|ref|XP_002139166.1| hypothetical protein [Cryptospo... 37 1.2
gi|154422195|ref|XP_001584110.1| Beige/BEACH domain containing p... 36 1.7
gi|326431520|gb|EGD77090.1| hypothetical protein PTSG_07428 [Sal... 36 2.5
gi|71014452|ref|XP_758714.1| hypothetical protein UM02567.1 [Ust... 35 4.4
>gi|325115322|emb|CBZ50877.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 971
Score = 70.9 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 2 LLPVELELREKNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDIIS-DAAIEVNNQ 60
LL VE ELREKNY AY+KCE++KF + +E W RQEK+SKTRELF+D+++ D +E +
Sbjct: 732 LLDVEEELREKNYAAYVKCEVHKFKQSEEGWTARQEKKSKTRELFRDLLAEDEGVEATDA 791
Query: 61 EAAD 64
A+
Sbjct: 792 TVAE 795
>gi|221502097|gb|EEE27843.1| hypothetical protein TGVEG_086490 [Toxoplasma gondii VEG]
Length = 950
Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 2 LLPVELELREKNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDIISD 52
LL VE ELREKNY AY+ CEI+ F +++E W RQEK+SKTRELFKD++++
Sbjct: 729 LLEVEDELREKNYAAYVNCEIHTFKRNEEGWATRQEKKSKTRELFKDLLAE 779
>gi|237838863|ref|XP_002368729.1| hypothetical protein TGME49_066400 [Toxoplasma gondii ME49]
gi|211966393|gb|EEB01589.1| hypothetical protein TGME49_066400 [Toxoplasma gondii ME49]
Length = 960
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 12 KNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDIISD 52
KNY AY+ CEI+ F +++E W RQEK+SKTRELFKD++++
Sbjct: 739 KNYAAYVNCEIHTFKRNEEGWATRQEKKSKTRELFKDLLAE 779
>gi|294948148|ref|XP_002785640.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239899619|gb|EER17436.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1098
Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 2 LLPVELELREKNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDII----SDAAIEV 57
L+ +E +++EKN + + +++F EEW+++ +K+S+ RELF DI+ S A +E
Sbjct: 974 LVKIEEDIKEKNMVLWKRLGLHEFKVANEEWEEKMQKQSQARELFDDILNLDTSTAGVET 1033
Query: 58 NNQE 61
++++
Sbjct: 1034 SHKK 1037
>gi|294874922|ref|XP_002767154.1| hypothetical protein Pmar_PMAR006543 [Perkinsus marinus ATCC 50983]
gi|239868603|gb|EEQ99871.1| hypothetical protein Pmar_PMAR006543 [Perkinsus marinus ATCC 50983]
Length = 516
Score = 40.8 bits (94), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 2 LLPVELELREKNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDII----SDAAIE 56
L+ +E +++EKN + + +++F EEW+++ +K+S+ RELF DI+ S A +E
Sbjct: 391 LVKIEEDIKEKNMVLWKRLGLHEFKVANEEWEEKMQKQSQARELFDDILNLDTSTAGVE 449
>gi|209875447|ref|XP_002139166.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209554772|gb|EEA04817.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 816
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 9 LREKNYTAYMKCEIYKFTK-DKEEWQKRQEKRSKTRELFKDII 50
++ +NY+ Y +CEI + + D++ W Q +++KTR +F DI+
Sbjct: 697 IKSRNYSLYKRCEIPLYLELDEKLWDISQSQKTKTRIMFSDIL 739
>gi|154422195|ref|XP_001584110.1| Beige/BEACH domain containing protein [Trichomonas vaginalis G3]
gi|121918355|gb|EAY23124.1| Beige/BEACH domain containing protein [Trichomonas vaginalis G3]
Length = 2734
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 18 MKCEIYKFTKDKEEWQKRQEKRSKTR---ELFKDIISDAAIEVNNQEAADLLPDNPKGKK 74
++ E KF K ++E +K EK+ + KD+ + I+ + + + + K +K
Sbjct: 1149 IQAEKQKFEKIQDENEKVDEKKEENEVKSNDNKDLDQENKIKNQKSQQENQVKNEEKVEK 1208
Query: 75 AEAESTPLQNEGKGFRKPKNENKNKKGTINGDEEEEINTKGKAEKEAKRAIDEI 128
ES +NEGK K + +++ K N +E+EIN + + ++ D+I
Sbjct: 1209 QPNESQTKENEGKQLNKDETKDQTNKNEENPVQEKEINKENVSPVKSDENHDKI 1262
>gi|326431520|gb|EGD77090.1| hypothetical protein PTSG_07428 [Salpingoeca sp. ATCC 50818]
Length = 849
Score = 35.8 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 LLPVELELRE--KNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDII 50
LL E +L+E + T C + F K+EW ++QE ++ ++FKDII
Sbjct: 601 LLAAEAKLKESPQGRTVMRNCRLAHFKWKKQEWMQKQEANARKAKMFKDII 651
>gi|71014452|ref|XP_758714.1| hypothetical protein UM02567.1 [Ustilago maydis 521]
gi|74702568|sp|Q4PBE6.1|HAT1_USTMA RecName: Full=Histone acetyltransferase type B catalytic subunit
gi|46098504|gb|EAK83737.1| hypothetical protein UM02567.1 [Ustilago maydis 521]
Length = 448
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 12 KNYTAYMKCEIYKFTKDKEEWQKRQEKRSKTRELFKDIISDAAIEVNNQEAADLLPDNPK 71
K Y +K IY+ KD ++Q++RSK +E F+ ++ + ++ + DLL D P
Sbjct: 353 KQYRLQVKARIYRQNKDILMQLEKQQQRSKLQETFEGVVEEYG-DMVGVDVEDLLDDGPS 411
Query: 72 GKKA--EAESTPLQNEGKGFRKPKNEN 96
G A A+ Q +G+G R N N
Sbjct: 412 GTGALYGADEEEDQEQGQGDRHYSNGN 438
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: Jul 22, 2011 4:42 PM
Number of letters in database: 5,058,227,080
Number of sequences in database: 14,777,732
Lambda K H
0.306 0.128 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,362,009,380
Number of extensions: 55719218
Number of successful extensions: 209916
Number of sequences better than 10.0: 1757
Number of HSP's gapped: 220019
Number of HSP's successfully gapped: 2298
Length of query: 177
Length of database: 5,058,227,080
Length adjustment: 130
Effective length of query: 47
Effective length of database: 3,137,121,920
Effective search space: 147444730240
Effective search space used: 147444730240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 76 (33.9 bits)