BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_5218_orf1
         (94 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157885952|emb|CAP09611.1| novel protein containing multiple s...    34     7.7  

>gi|157885952|emb|CAP09611.1| novel protein containing multiple sushi domains (SCR repeat) [Danio
           rerio]
          Length = 837

 Score = 33.9 bits (76), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 16  SWSSPCPGISTLTSTPPRWYEAPLSRNSLIIWYINVNILTYVLSLIYTQTHWSKCFCVNQ 75
           +W +P        STPP+   A ++    + +YI+ +I+TY     +T    S   C+N 
Sbjct: 592 TWETPTCNAGVRCSTPPKVVNALITSKPKL-FYIDKSIVTYACRSPFTMKGQSTVSCLNG 650

Query: 76  KPFDSIVCYAKQAR 89
           K  ++ +C AK  R
Sbjct: 651 KWEETPICEAKCPR 664


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.328    0.138    0.477 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 936,688,100
Number of extensions: 32030794
Number of successful extensions: 106230
Number of sequences better than 10.0: 3
Number of HSP's gapped: 106630
Number of HSP's successfully gapped: 3
Length of query: 94
Length of database: 5,058,227,080
Length adjustment: 64
Effective length of query: 30
Effective length of database: 4,112,452,232
Effective search space: 123373566960
Effective search space used: 123373566960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 76 (33.9 bits)