BLASTP 2.2.24 [Aug-08-2010] 

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eten_4873_orf2
         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           14,777,732 sequences; 5,058,227,080 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|330752429|emb|CBL87379.1| dihydrodipicolinate synthetase [unc...    39     0.24 
gi|330752596|emb|CBL87542.1| hypothetical protein S18_873_0036 [...    37     0.92 
gi|330752598|emb|CBL87543.1| glycosyl transferase protein, famil...    37     0.99 
gi|330752782|emb|CBL88301.1| hypothetical protein S18_841_0001 [...    37     1.0  
gi|330752368|emb|CBL87320.1| hypothetical protein S18_1049_0001 ...    37     1.2  
gi|241888666|ref|ZP_04775973.1| oligoendopeptidase F [Gemella ha...    35     2.8  
gi|329767967|ref|ZP_08259478.1| hypothetical protein HMPREF0428_...    35     3.1  

>gi|330752429|emb|CBL87379.1| dihydrodipicolinate synthetase [uncultured Flavobacteria bacterium]
          Length = 257

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 5   GKPGGFPIFFAWGNFPFSPVGFLGKRPARFPFPKFCPPCWGM 46
           GK    P   A  + P SP G + KRPA    P  C   W M
Sbjct: 189 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAAEWRM 230


>gi|330752596|emb|CBL87542.1| hypothetical protein S18_873_0036 [uncultured Flavobacteria
          bacterium]
          Length = 71

 Score = 37.0 bits (84), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 5  GKPGGFPIFFAWGNFPFSPVGFLGKRPARFPFPKFCPPCWGM 46
          GK    P   A  + P SP G + KRPA    P  C   W M
Sbjct: 3  GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAAEWRM 44


>gi|330752598|emb|CBL87543.1| glycosyl transferase protein, family 1 [uncultured Flavobacteria
           bacterium]
          Length = 293

 Score = 37.0 bits (84), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 5   GKPGGFPIFFAWGNFPFSPVGFLGKRPARFPFPKFCPPCWGM 46
           GK    P   A  + P SP G + KRPA    P  C   W M
Sbjct: 225 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAAEWRM 266


>gi|330752782|emb|CBL88301.1| hypothetical protein S18_841_0001 [uncultured Dokdonia sp.]
          Length = 121

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 5  GKPGGFPIFFAWGNFPFSPVGFLGKRPARFPFPKFCPPCWGME 47
          GK    P   A  + P SP G + KRPA    P  C   W M 
Sbjct: 53 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAAEWRMA 95


>gi|330752368|emb|CBL87320.1| hypothetical protein S18_1049_0001 [uncultured Sphingobacteria
          bacterium]
          Length = 99

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 5  GKPGGFPIFFAWGNFPFSPVGFLGKRPARFPFPKFCPPCWGME 47
          GK    P   A  + P SP G + KRPA    P  C   W M 
Sbjct: 31 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCAAEWRMA 73


>gi|241888666|ref|ZP_04775973.1| oligoendopeptidase F [Gemella haemolysans ATCC 10379]
 gi|241864689|gb|EER69064.1| oligoendopeptidase F [Gemella haemolysans ATCC 10379]
          Length = 563

 Score = 35.4 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 66  LFFYPLGEIGKIPFYFKKLTRIGVGCFPFWKK 97
           LFFY  G +  +PFY+   T   V  F FWKK
Sbjct: 471 LFFYRQGHLFSVPFYYIDYTLAQVCAFQFWKK 502


>gi|329767967|ref|ZP_08259478.1| hypothetical protein HMPREF0428_01175 [Gemella haemolysans M341]
 gi|328838452|gb|EGF88060.1| hypothetical protein HMPREF0428_01175 [Gemella haemolysans M341]
          Length = 563

 Score = 35.0 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 66  LFFYPLGEIGKIPFYFKKLTRIGVGCFPFWKK 97
           LFFY  G +  +PFY+   T   V  F FWKK
Sbjct: 471 LFFYRQGHLFSVPFYYIDYTLAQVCAFQFWKK 502


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Jul 22, 2011  4:42 PM
  Number of letters in database: 5,058,227,080
  Number of sequences in database:  14,777,732
  
Lambda     K      H
   0.333    0.159    0.588 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 14777732
Number of Hits to DB: 1,531,750,403
Number of extensions: 64875205
Number of successful extensions: 100760
Number of sequences better than 10.0: 9
Number of HSP's gapped: 101569
Number of HSP's successfully gapped: 9
Length of query: 121
Length of database: 5,058,227,080
Length adjustment: 88
Effective length of query: 33
Effective length of database: 3,757,786,664
Effective search space: 124006959912
Effective search space used: 124006959912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 76 (33.9 bits)