BLASTP 2.2.24 [Aug-08-2010] Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Eten_4873_orf1 (100 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 14,777,732 sequences; 5,058,227,080 total letters
Score E Sequences producing significant alignments: (bits) Value gi|145601539|ref|XP_365210.2| hypothetical protein MGG_01912 [Ma... 34 7.2 >gi|145601539|ref|XP_365210.2| hypothetical protein MGG_01912 [Magnaporthe oryzae 70-15] gi|145009592|gb|EDJ94248.1| hypothetical protein MGG_01912 [Magnaporthe oryzae 70-15] Length = 766 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 21/34 (61%) Query: 36 LGPFIFKLGKVFVGGRFWGSLGNFPFWGGVLNFR 69 LGP + LG+V GGR W + GN P+ GVL + Sbjct: 112 LGPAVGPLGRVAKGGRNWEATGNDPYLTGVLAYE 145 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Jul 22, 2011 4:42 PM Number of letters in database: 5,058,227,080 Number of sequences in database: 14,777,732 Lambda K H 0.329 0.160 0.577 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 14777732 Number of Hits to DB: 895,710,604 Number of extensions: 37881028 Number of successful extensions: 81726 Number of sequences better than 10.0: 23 Number of HSP's gapped: 82267 Number of HSP's successfully gapped: 25 Length of query: 100 Length of database: 5,058,227,080 Length adjustment: 69 Effective length of query: 31 Effective length of database: 4,038,563,572 Effective search space: 125195470732 Effective search space used: 125195470732 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 76 (33.9 bits)