BLASTP 2.2.24 [Aug-08-2010] Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= Eten_4731_orf2 (107 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 14,777,732 sequences; 5,058,227,080 total letters
Score E Sequences producing significant alignments: (bits) Value gi|255933155|ref|XP_002558048.1| Pc12g12340 [Penicillium chrysog... 35 4.5 >gi|255933155|ref|XP_002558048.1| Pc12g12340 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582667|emb|CAP80861.1| Pc12g12340 [Penicillium chrysogenum Wisconsin 54-1255] Length = 467 Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 42 PPRGGANFSPPFPKKNFGGNPPRLNGGTAPPVHPPGGKQ 80 PP+ G +PP +G PP+ +G APP PP G+Q Sbjct: 74 PPQQGQYGAPPAQGGPYGATPPQPHGYHAPPAQPPYGQQ 112 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Jul 22, 2011 4:42 PM Number of letters in database: 5,058,227,080 Number of sequences in database: 14,777,732 Lambda K H 0.310 0.139 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 14777732 Number of Hits to DB: 1,707,200,226 Number of extensions: 97026163 Number of successful extensions: 291334 Number of sequences better than 10.0: 4843 Number of HSP's gapped: 298228 Number of HSP's successfully gapped: 7134 Length of query: 107 Length of database: 5,058,227,080 Length adjustment: 75 Effective length of query: 32 Effective length of database: 3,949,897,180 Effective search space: 126396709760 Effective search space used: 126396709760 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 76 (33.9 bits)